cell-cell-interaction cell-segmentation digital-slide-archive image-processing mibiscope multichannel multiplexed-imaging multiplexed-imaging-analysis ome-tiff phenotyping proteomics proteomics-data-analysis single-cell spatial-biology spatial-data-analysis whole-slide-imaging

bioformats image-analysis image-processing microscopy multiplexed-imaging nextflow nf-core ome-tiff pipeline registration segmentation single-cell spatial stitching tma workflow