Scientific Software
Updated 6 months ago
HistoJS
HistoJS: Web-Based Analytical Tool for Advancing Multiplexed Images - Published in JOSS (2024)
Scientific Software · Peer-reviewed
Updated 5 months ago
https://github.com/bigbio/sdrf-pipelines
`sdrf-pipelines` is the official SDRF file validator and converts SDRF to pipeline configuration files
Updated 6 months ago
mspms
R package for the analysis of Multiplex Substrate Profiling by Mass Spectrometry for Proteases (MSP-MS) Data
Updated 6 months ago
viral-experiment-lip-analysis
Viral Experiment Limited Proteolysis (LiP) Analysis Workflow
Updated 4 months ago
https://github.com/fgcz/prolfqua
Differential Expression Analysis tool box R lang package for omics data
Updated 6 months ago
microbial-isolate-lip-analysis
Microbial Isolate Limited Proteolysis (LiP) Analysis Workflow
Updated 6 months ago
fragterminomics
Annotation and processing of peptides from FragPipe search results
Updated 5 months ago
https://github.com/bmascat/lfq-proteomics-pipeline
All code, bash scrypts and pipelines used to analyse and visualise proteomic data from my experiments with my first Crispr KO model.