OSTIR
OSTIR: open source translation initiation rate prediction - Published in JOSS (2021)
rna-tools
🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online
Structstrings
:package: Structstrings: implementation of Biostrings to work with dot bracket annotations
https://github.com/baaihealth/opencomplex
Trainable PyTorch framework for developing protein, RNA and complex models.
rstudiopymolpysnips
PyMOL snippet library is written in Python for use in RStudio via the R reticulate package and the PyMOL Python API.
comradesoo
Repo for the comradesOO R package. Designed for the analysis of RNA structural data obtained through RNA cross-linking and high-throughput sequencing experiments
jupyterlabpymolpysnips
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.