Scientific Software
Updated 6 months ago

Nextclade — Peer-reviewed • Rank 14.3 • Science 95%

Nextclade: clade assignment, mutation calling and quality control for viral genomes - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

JavaPermutationTools — Peer-reviewed • Rank 6.2 • Science 98%

JavaPermutationTools: A Java Library of Permutation Distance Metrics - Published in JOSS (2018)

Updated 6 months ago

code2seq • Rank 8.6 • Science 64%

Code for the model presented in the paper: "code2seq: Generating Sequences from Structured Representations of Code"

Updated 6 months ago

Structstrings • Rank 12.8 • Science 49%

:package: Structstrings: implementation of Biostrings to work with dot bracket annotations

Updated 6 months ago

trna • Rank 1.6 • Science 49%

:package: tRNA: Analyzing tRNA sequences and structures

Updated 6 months ago

bold • Rank 5.3 • Science 36%

Interface to the Bold Systems barcode webservice

Updated 6 months ago

aitviewer • Science 57%

A set of tools to visualize and interact with sequences of 3D data.

Updated 6 months ago

math-base-special-lucasf • Science 44%

Compute the nth Lucas number as a single-precision floating-point number.

Updated 5 months ago

https://github.com/biocommons/uta • Science 26%

Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image

Updated 5 months ago

https://github.com/biocommons/mirrors-ncbi • Science 13%

Makefile (of all things) to space-efficiently mirror selected NCBI resources