https://github.com/biosimulators/biosimulators_copasi
COPASI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators_utils
Utilities for building standardized command-line interfaces for biosimulation software packages
https://github.com/biosimulators/biosimulators_test_suite
Tool for validating that biosimulation software tools implement the BioSimulators standards for simulators
https://github.com/biosimulators/biosimulators_tellurium
tellurium biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators_pysces
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators_amici
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulations/biosimulations-bigg
Command-line program and scheduled GitHub action for publishing the BiGG model repository to BioSimulations
https://github.com/biosimulators/biosimulators_masspy
MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators_cobrapy
COBRApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators_bionetgen
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
https://github.com/biosimulators/biosimulators
Registry of containerized biosimulation tools that support a standard command-line interface
biosimulators_simulator_template
Template for a repository for building a BioSimulators-compliant command-line interface and Dockerfile for a biosimulation program
biosimulations
A platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results