Updated 10 months ago
scanneo2
Snakemake-based computational workflow for neoantigen prediction from diverse sources
Updated 10 months ago
https://github.com/angrymaciek/mapp
🗺️ MAPP is a computational method which enables identification of binding motifs for RNA-binding proteins that shape pre-mRNA processing under specific conditions.
Updated 10 months ago
https://github.com/ccicb/introme
Introme prioritises coding and noncoding splice-altering variants for clinical variant interpretation
Updated 10 months ago
inferring-exon-and-intron-metadata-from-.gff-file
This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.