Updated 10 months ago

flo • Rank 6.3 • Science 77%

Same species annotation lift over pipeline.

Updated 10 months ago

gff2ddbj • Science 44%

This tool will convert GFF3 files into DDBJ annotation files. It was created to work with Braker2 generated GFF files, but should work with any other GFF3 file as well.

Updated 10 months ago

bamtocov • Science 67%

🏔 coverage extraction from BAM/CRAM files, supporting targets 📊  

Updated 10 months ago

https://github.com/alejandrogzi/gxf2bed • Science 26%

fastest GTF/GFF-to-BED converter chilling around

Updated 10 months ago

inferring-exon-and-intron-metadata-from-.gff-file • Science 57%

This pipeline infers exon functional annotations using coordinates from a .gff file and derives corresponding intron coordinates along with relevant annotations. Users can optionally specify the length of intronic fragments to extract. The pipeline is suited for splicing code analyses.

Updated 10 months ago

https://github.com/alejandrogzi/noel • Science 13%

GTF/GFF per gene non-overlapping exon length calculator

Updated 10 months ago

https://github.com/candygene/siga • Science 23%

Semantically Interoperable Genome Annotations