brain-tissue-radiomics-on-clinical-and-quantitative-mri-for-ms
Supplementary materials for the paper
betes
The Baroclinic Ekman Transport Equation Solver is a numerical code to simulate wind-driven surface boundary layer currents for steady-state 1D problems.
autolabeller
This tool can automatically generate anatomical and functional labels of spatial maps of brain activity.
https://github.com/azavea/iow-boundary-tool
A tool for drawing water utility service area boundaries
ecosimr
Repository for EcoSimR, by Gotelli, N.J. , Hart E. M. and A.M. Ellison. 2014. EcoSimR 0.1.0
https://github.com/coecms/cms-conda-singularity
A repository for the squashfs'd hh5 conda installations.
https://github.com/astorfi/pytorch-seq2seq
An open source framework for seq2seq models in PyTorch.
hemelb-carpentries
A half-day lesson on tuning usage of HemeLB for large-scale HPC systems
https://github.com/brianhie/mutational-semantics-neurips2020
Learning mutational semantics
2019-06-04-azti-git
Frozen Software Carpentry Git-novice lesson for AZTI-TECNALIA Git track
laplaceapproximations.jl
Approximate integrals through second-order Taylor expansions
developments-in-next-generation-sequencing
Developments in next generation sequencing: instruments, read lengths, throughput. See
modelo_tese_imecc
Modelo de tese para o Instituto de Matemática, Estatística e Computação Científica (IMECC) da Universidade Estadual de Campinas (UNICAMP)
clustervoronoicode
This is an addition to the cellGPU code which adds a concertation gradient which alters the cells' mechanical properties.
protein-metabolite
Code repository for "Protein-Metabolite Association Studies Identify Novel Proteomic Determinants of Metabolite Levels in Human Plasma"
intropipeline
Detection of Saccharomyces paradoxus DNA across Saccharomyces cerevisiae, and vice versa.
mccabe-thiele-for-gnu-octave
A toolbox for the McCabe-Thiele method for GNU Octave
https://github.com/amir22010/pytorch-gan
PyTorch implementations of Generative Adversarial Networks.
https://github.com/clearsy/system-monitoring
Support for the article "Use of certified industrial tools for formal analysis and monitoring of Communications-Based Train Control Systems"
https://github.com/alejoriosm04/laraveltutorials
Laravel tutorial project for seventh-semester course "Spec. Software Engineering Top." (ST0261) taught at EAFIT University by prof Daniel Correa.
https://github.com/amir22010/pytorch-transformers
👾 A library of state-of-the-art pretrained models for Natural Language Processing (NLP)
https://github.com/disneyhogg/wiman-translation
A translation from German to English of the work by Anders Wiman "Ueber die algebraischen Curven von den Geschlechtern p = 4, 5 und 6, welche eindeutige Transformationen in sich besitze", 1895.
https://github.com/bioinfomachinelearning/tulip
Template-based modeling for accurate prediction of ligand-protein complex structures (TULIP)
https://github.com/bioinfomachinelearning/cryo2struct
The programs for preprocessing cryo-EM density maps for machine learning
https://github.com/amanzi/ats-demos
Demonstration problems of ATS capability (look here first!)
https://github.com/amazon-science/camml
CaMML:Context-Aware MultiModal Learner for Large Models (ACL 2024)
sfm
R package sfm, stochastic frontier models for cross-section and panel models. This package is currently being developed to work in a wide range of applications. The main functions of the package are two cross-sectional functions: "sfm" and "zsfm" as well as a panel function "psfm" which all implement various SFA based estimators.
https://github.com/disneyhogg/brings_curve
A repository holding code related to my paper with H. W. Braden on Bring's curve.
https://github.com/amir22010/minigo
An open-source implementation of the AlphaGoZero algorithm
https://github.com/alexanderbertrandlab/linear-stimulus-reconstruction-aad-av-gc-aad-dataset
All MATLAB code to reproduce experiments and results that show that linear stimulus reconstruction for AAD works on the KU Leuven audiovisual, gaze-controlled auditory attention decoding (AV-GC-AAD) dataset
https://github.com/andreasvc/strongweaklit
Code and data for the chapter "Dutch Strong and Weak Pronouns as a Stylistic Marker of Literariness"
2025-04-07-kit
Workshop page for the Software Carpentry Workshop @ KIT - Spring 2025
https://github.com/albertocuadra/helmholtz_htr
Routine to compute the dissipation, dissipation rate, and the solenoidal and compressive parts of a three-dimensional velocity field of a DNS obtained using the Hypersonic Task-based Research solver
https://github.com/albertocuadra/fvm1d
Educational GUI to learn about Finite Volume Methods in 1D (linear and non-linear equations)
edge-concert
A simple app to demonstrate cloudflare worker features like static site, htmlrewriter, geo location, etc.
processing-codes-of-scholarly-data
These are some codes I wrote for processing scholarly datasets.
https://github.com/bioinfomachinelearning/hicdiff
Diffusion models for denoising Hi-C chromosome conformation capturing data
https://github.com/astorfi/llm-course
Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.
2023-11-01-ttt-online-edt
Workshop website for November 1-2, 2023, Carpentries Instructor Training
https://github.com/astorfi/icd-prediction-mimic
Predicting ICD Codes from Clinical Notes
https://github.com/dbt4u/twitterhashflags
Some Twitter Hashflags in the overview
https://github.com/alexdesiqueira/udacity-cs212-design_of_computer_programs
Notes and solutions for Udacity's course "Design of Computer Programs".
https://github.com/dissco/fairplaybook
FAIR Research Data Management Playbook templates
elliptical-empirical
Empirical example about estimation of multivariate elliptical extreme quantile regions