r-ecology-lesson • Rank 11.2 • Science 77%

Data Analysis and Visualization in R for Ecologists

geospatial-python • Rank 9.4 • Science 77%

Introduction to Geospatial Raster and Vector Data with Python

python-intermediate-development • Rank 8.1 • Science 77%

"Intermediate Research Software Development Skills (Python)" Lesson Material

openrefine-ecology-lesson • Rank 8.0 • Science 77%

Data Cleaning with OpenRefine for Ecologists

spreadsheet-ecology-lesson • Rank 7.9 • Science 77%

Data Organization in Spreadsheets for Ecologists

gap-lesson • Rank 5.3 • Science 77%

Programming with GAP

genome-mining-workshop • Rank 4.9 • Science 77%

Genome Mining Workshop Overview

good-enough-practices • Rank 6.4 • Science 67%

Good Enough Practices in Scientific Computing

pangenomics • Rank 6.2 • Science 67%

Pangenome Analysis in Prokaryotes Lesson

r-raster-vector-geospatial • Rank 9.1 • Science 64%

Introduction to Geospatial Raster and Vector Data with R

r-intro-geospatial • Rank 9.0 • Science 64%

Introduction to R for Geospatial Data

python-aos-lesson • Rank 8.3 • Science 64%

Python for Atmosphere and Ocean Scientists

metagenomics-analysis • Rank 7.5 • Science 64%

Data Processing and Visualization for Metagenomics

jekyll-pages-novice • Rank 7.4 • Science 64%

Building Websites with Jekyll & GitHub Pages.

python-ecology-lesson-es • Rank 7.2 • Science 64%

Análisis y visualización de datos usando Python

metagenomics-workshop • Rank 6.3 • Science 64%

Metagenomics Workshop Overview

metagenomics-shell • Rank 5.4 • Science 64%

Introduction to the Command Line for Metagenomics

data-organisation-for-better-analysis • Rank 4.1 • Science 64%

Data Organization in Spreadsheets to Ease Further Processing

python-novice-gapminder • Rank 10.9 • Science 54%

Plotting and Programming in Python

python-ecology-lesson • Rank 10.3 • Science 54%

Data Analysis and Visualization in Python for Ecologists

hpc-intro • Rank 9.6 • Science 54%

An Introduction to High Performance Computing

sql-ecology-lesson • Rank 9.0 • Science 54%

Data Management with SQL for Ecologists

docker-introduction • Rank 8.8 • Science 54%

Reproducible Computational Environments using Containers

git-novice-branch-pr • Rank 8.0 • Science 54%

Version Control with Git

machine-learning-novice-python • Rank 7.2 • Science 54%

Introduction to Machine Learning with Python

machine-learning-librarians-archivists • Rank 6.7 • Science 54%

Introduction to AI for GLAM

swc-ext-python • Rank 6.5 • Science 54%

Workflows with Python and Git

snakemake-novice-bioinformatics • Rank 5.8 • Science 54%

Introduction to Snakemake for Bioinformatics

lc-litsearchr • Rank 5.4 • Science 54%

Library Carpentry: Introduction to R and litsearchr

hpc-workflows • Rank 4.4 • Science 54%

HPC Workflow Management with Snakemake

reproducible-ml-workflows • Rank 3.3 • Science 54%

Reproducible Machine Learning Workflows for Scientists

tei-xml • Rank 3.2 • Science 54%

Lesson: Introduction to TEI (under development)

metagenomics-r • Rank 5.8 • Science 51%

Introduction to R for Metagenomics

green-software-hpc • Rank 2.3 • Science 54%

Green Software Use on HPC

metagenomics-organization • Rank 1.9 • Science 54%

Project Organization and Management for Metagenomics

fair-for-leaders • Rank 1.8 • Science 54%

FAIR for leaders

blogging-with-hugo-and-github-pages • Rank 1.8 • Science 54%

Carpentries Incubator lesson to learn how to build blog sites with Hugo and GitHub Pages

fair-for-busy-biologists • Rank 1.4 • Science 54%

A short course on FAIR and data managment for biomedical research

r-geospatial-urban • Rank 5.0 • Science 49%

Geospatial Data Carpentry with R for Urbanists

kubernetes-introduction • Rank 0.0 • Science 54%

Reproducible Computational Environments Using Containers: Introduction to Kubernetes

sdc-bids-fmri • Rank 6.2 • Science 44%

fMRI Imaging Analysis

sdc-bids-intromri • Rank 5.6 • Science 44%

Introduction to MRI and BIDS

lesson-r-packaging • Rank 5.5 • Science 44%

R Packaging

cwl-novice-tutorial • Rank 8.4 • Science 41%

Introduction to Workflows with Common Workflow Language

shell-extras • Rank 7.8 • Science 41%

Extra Unix Shell Material

natural-language-processing • Rank 4.0 • Science 44%

Fundamentals of natural language processing with Python

workflows-nextflow • Rank 6.9 • Science 41%

Workflow management with Nextflow and nf-core

efficient-computing-in-julia • Rank 3.8 • Science 44%

A lesson on efficient computing in the Julia language

sql-humanities-lesson • Rank 6.7 • Science 41%

SQL for Humanities

gen-ai-coding • Rank 3.7 • Science 44%

AI-assisted Coding with Codeium / GitHub Copilot

reproducible-research-through-reusable-code-in-1-day • Rank 3.5 • Science 44%

Lesson material for Reproducible research through reusable code workshop

lc-xml • Rank 6.4 • Science 41%

Library Carpentry: XML - not currently maintained.

data-science-for-docs • Rank 6.2 • Science 41%

Data Science For Practicing Clinicians

gpu-speedups • Rank 5.8 • Science 41%

GPU Speedups in Python

topological-data-analysis • Rank 2.7 • Science 44%

Topological data analysis for Comparative Genomics

sdc-eeglab • Rank 5.3 • Science 41%

Processing data with EEGLAB

introduction-to-latex • Rank 4.5 • Science 41%

A Carpentries style lesson introducing creating documents in LaTeX.

python-particle-physics • Rank 1.4 • Science 44%

Particle Physics in Python

statistical-experimental-design • Rank 1.4 • Science 44%

Statistical Experimental Design

regex-novice-biology • Rank 4.1 • Science 41%

Regular Expressions for Biologists

ide-novice-spyder • Rank 4.1 • Science 41%

Novice Spyder

eukref_pr2 • Rank 4.0 • Science 41%

EukRef PR2

r-survival-analysis • Rank 0.7 • Science 44%

R for Survival Analysis

java-novice-inflammation • Rank 0.7 • Science 44%

Programming with Java

statistics-r-public-health • Rank 3.2 • Science 41%

Statistical analysis in R for public health.

microbial-amplicon-analysis • Rank 3.0 • Science 41%

A lesson teaching analysis of microbial amplicon data

ai-teacher-feedback-lesson • Rank 0.0 • Science 44%

Evaluating AI in Teacher Performance Reviews: Benefits, Biases, and Best Practices

carpentriesoffline_instructor_onboarding_obsolete • Rank 0.0 • Science 44%

CarpentriesOffline is a project that aims to bring Carpentries workshops to areas where there is no or limited Internet access. This repository contains a lesson in the Carpentries format for training Carpentries instructors to use the CarpentriesOffline hardware and software infrastructure in such a workshop.

python-pandas-power-consumption • Rank 2.5 • Science 41%

Data management and analytic pipelines for engineers

fair-data-management-agriculture • Rank 2.5 • Science 41%

FAIR Data Management for Long-term Agriculture Experiments

citable-software • Rank 2.5 • Science 41%

Making Code Citable

frictionless-data-agriculture • Rank 2.3 • Science 41%

Frictionless Data for Agriculture Research

sql-business • Rank 2.3 • Science 41%

SQL for Business

python-eofdm-precursors • Rank 1.8 • Science 41%

Flight data analysis to detect features relevant to the continual improvement of safety.

proteomics-novice-qfeatures • Rank 1.4 • Science 41%

Introduction to QFeatures, Bioconductor data object for proteomics

zotero-intro • Rank 0.7 • Science 41%

Introduction to Zotero lesson

data-management-training • Rank 0.0 • Science 39%

Data Handling and Management Training

r-ml-tabular-data • Rank 6.3 • Science 28%

A Data-Carpentry-style lesson on some ML techniques in R

camera-traps • Rank 5.3 • Science 28%

Data Carpentry for Camera Traps

pangenomics-python • Rank 2.1 • Science 31%

Introduction to Python: Pangenomics

machine-learning-novice-r • Rank 1.1 • Science 31%

Introduction to Machine Learning with R

logistic-regression-public-health • Rank 4.1 • Science 28%

Logistic regression for public health

linear-mixed-models-public-health • Rank 0.7 • Science 31%

Linear mixed effects modelling for public health

k8s-deployment-novice • Rank 0.7 • Science 31%

Deploying Applications on Kubernetes

r-object-comparison-waldo • Rank 0.7 • Science 31%

Comparison of data objects in R

ml-python-supervised-learning • Rank 0.7 • Science 31%

Supervised Learning with Python

relational-database-genealogy • Rank 0.7 • Science 31%

Relational Databases for Genealogists and Family Historians

neuroimaging-workshop • Rank 0.0 • Science 31%

Neuroimaging Workshop

rotating-photo-tree • Rank 0.0 • Science 18%

An example lesson repository for use in lesson template screencasts

astronomy-python • Science 49%

bioc-project • Science 44%

Introduction to the Bioconductor project

git-collaborative • Science 57%

Collaborative distributed version control lesson.

spreadsheets-socialsci • Science 67%

Data Organization in Spreadsheets for Social Scientists

reproducible-publications-quarto • Science 44%

Introduction to Reproducible Publications with Quarto

lc-open-refine • Science 67%

Library Carpentry: OpenRefine

qtl-mapping • Science 26%

lc-git • Science 67%

Library Carpentry: Introduction to Git

jobefficiency • Science 44%

HPC Carpentry-like job efficiency guide by HPC.NRW

python-novice-inflammation • Science 67%

Programming with Python

building_an_hpc_for_training • Science 26%

A Carpentries style lesson on how to build an HPC from laptops or Raspberry Pis for training and prototyping purposes.