tpcp
tpcp: Tiny Pipelines for Complex Problems - A set of framework independent helpers for algorithms development and evaluation - Published in JOSS (2023)
DataDepsGenerators.jl
DataDepsGenerators.jl: making reusing data easy by automatically generating DataDeps.jl registration code - Published in JOSS (2018)
EFAshiny
EFAshiny: An User-Friendly Shiny Application for Exploratory Factor Analysis - Published in JOSS (2018)
pointblank
Data quality assessment and metadata reporting for data frames and database tables
lasio
Python library for reading and writing well data using Log ASCII Standard (LAS) files
bio_data_guide
Standardizing Marine Biological Data Working Group - An open community to facilitate the mobilization of biological data to OBIS.
data-management-resources
Repo supporting the manuscript 'Journeying towards best practice data management in biodiversity genomics'.
https://github.com/girder/girder
A data management platform for the web, developed by Kitware
fair-for-busy-biologists
A short course on FAIR and data managment for biomedical research
piqmie
Proteomics Identifications & Quantitations Data Management & Integration Service
SMMT
R tool to get municipality mapping table between two time points for Swiss municipalities
fair-data-management-agriculture
FAIR Data Management for Long-term Agriculture Experiments
https://github.com/bluebrain/nexus-forge
Building and Using Knowledge Graphs made easy
https://github.com/annakrystalli/dataspice-tutorial
Tutorial in practical research data management: creating simple metadata files using dataspice
https://github.com/aphp/ig-fhir-dm
FHIR Implementation Guide for Data Management
nossaflex
Functions to batch rename photo files with information rich names following the NOSSAFLEX standard and a function to save these metadata inside the exif slots of the scans
covid-19_piedmont
COVID-19 Surveillance Data Modelling and Management Pipeline in Piedmont.
neurotic
Curate, visualize, annotate, and share your behavioral ephys data using Python
https://github.com/ajinkya-kulkarni/mpinat-lsm-application
Streamlit app for scientific data management at the Max Planck Institute for Multidisciplinary Sciences.
https://github.com/csadorf/pydata-ann-arbor-2018
Slides and notebooks demonstrating signac for PyData Ann Arbor Meetup 2018
githubprocedureslab
Code Management Guidelines: R and GitHub Starter Kit for New Team Members
https://github.com/afsc-gap-products/data-requests
An empty repo for tracking requests for GAP data
lc-data-intro
Library Carpentry: Introduction to Working with Data (Regular Expressions)
https://github.com/centre-for-humanities-computing/data-management-schema-draft
prototype for FAIR-like metadata
https://github.com/cumbof/open-omics-api
A open-source framework for organising multi-omics data from heterogeneous data sources
https://github.com/datalab-org/datalab-app-plugin-insitu
datalab block plugin for in situ measurements (NMR, UV-Vis, XRD)
clintrialx
R package to fetch and explore clinical trials data from freely available registries. Fetch data in bulk, customize data and build comprehensive html reports. Currently, it supports the ClinicalTrials.gov registry and CTTI AACT (Access to Aggregate Content of ClinicalTrials.gov).
https://github.com/hauselin/docdata
R package to generate dataset documentation semi-automatically https://hauselin.github.io/docdata/
rdmkit
ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.
datalab-server
datalab is a place to store experimental data and the connections between them.