GitHub
https://github.com/daducci/amico
Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusion MRI data
Water Systems Integrated Modelling framework, WSIMOD
Water Systems Integrated Modelling framework, WSIMOD: A Python package for integrated modelling of water quality and quantity across the water cycle - Published in JOSS (2023)
https://github.com/galsim-developers/galsim
The modular galaxy image simulation toolkit. Documentation:
beamshapes
beamshapes: a Python package to generate directivity patterns for various sound source models - Published in JOSS (2022)
onstove
This repository contain the general code for the Open Source Spatial Clean Cooking Tool OnStove
GLCMTextures
This R package calculates the most common gray-level co-occurrence matrix (GLCM) texture metrics used for spatial analysis on raster data.
ethicml
Package for evaluating the performance of methods which aim to increase fairness, accountability and/or transparency
differentialabundance
Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq
https://github.com/bowang-lab/bionic
Biological Network Integration using Convolutions
SimpleDiffEq
Simple differential equation solvers in native Julia for scientific machine learning (SciML)
specify7
An open-source platform for managing biological and geological collections.
ideal
Interactive Differential Expression AnaLysis - DE made accessible and reproducible
nbomicroscopymetadataspecs
The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Group (https://www.bioimagingna.org/qc-dm-wg) for documenting microscopy experiments and assessing the quality of image data.
edt
Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.
SpaDES.tools
Additional modelling tools for Spatial Discrete Event Simulation (SpaDES) module development
oscar.jl
A comprehensive open source computer algebra system for computations in algebra, geometry, and number theory.
twoaxistracking
twoaxistracking is a python package for simulating two-axis tracking solar collectors, particularly self-shading.
medicalgpt
MedicalGPT: Training Your Own Medical GPT Model with ChatGPT Training Pipeline. 训练医疗大模型,实现了包括增量预训练(PT)、有监督微调(SFT)、RLHF、DPO、ORPO、GRPO。
rchart
Comprehensive charting package to plot and compare data across scenarios, regions, sectors and time periods.
sog-bloomcast-ensemble
Successor to the SoG-bloomcast project that uses an ensemble forecast.
decision
Data-driven Efficient Configuration of Instruments by Scientific Intent for Operational Needs (DECISION)
suny-oswego-workshop-2024
Repository for my SUNY Oswego Workshop talk on April 9th and April 11th, 2024
emonet
CNN-LSTM model for audio emotion detection in children with adverse childhood events.
@stdlib/regexp-function-name
Return a regular expression to capture a function name.
@stdlib/constants-float64-ninf
Double-precision floating-point negative infinity.
@stdlib/constants-array-max-typed-array-length
Maximum length for a typed array.
@stdlib/assert-has-uint8clampedarray-support
Detect native Uint8ClampedArray support.
@stdlib/utils-keys
Return an array of an object's own enumerable property names.