georeader-spaceml • Rank 11.2 • Science 67%

🛰️ Process raster data in python

https://github.com/craylabs/smartredis • Rank 19.2 • Science 59%

SmartSim Infrastructure Library Clients.

pypuf • Rank 11.2 • Science 67%

Cryptanalysis of Physically Unclonable Functions

rwkv-lm • Rank 11.2 • Science 67%

RWKV (pronounced RwaKuv) is an RNN with great LLM performance, which can also be directly trained like a GPT transformer (parallelizable). We are at RWKV-7 "Goose". So it's combining the best of RNN and transformer - great performance, linear time, constant space (no kv-cache), fast training, infinite ctx_len, and free sentence embedding.

RefManageR — Peer-reviewed • Rank 19.2 • Science 59%

RefManageR: Import and Manage BibTeX and BibLaTeX References in R - Published in JOSS (2017)

python-ta • Rank 16.1 • Science 62%

Adventures in code analysis for teaching Python.

Polyhedra • Rank 14.1 • Science 64%

Polyhedral Computation Interface

mlconjug3 • Rank 14.1 • Science 64%

A Python library to conjugate verbs in French, English, Spanish, Italian, Portuguese and Romanian (more soon) using Machine Learning techniques.

mulensmodel • Rank 14.1 • Science 64%

Microlensing Modelling package

asreview-makita • Rank 11.1 • Science 67%

Workflow generator for simulation studies using the command line interface of ASReview LAB

lime • Rank 27.1 • Science 51%

Lime: Explaining the predictions of any machine learning classifier

prototype-zne • Rank 11.1 • Science 67%

Zero Noise Extrapolation (ZNE) prototype for error mitigation on the Qiskit Estimator primitive

gecco-tool • Rank 11.1 • Science 67%

GEne Cluster prediction with COnditional random fields.

sai • Rank 1.1 • Science 77%

Using explainable to identify regional climate signals to stratospheric aerosol injection

pydesrap_stroke • Rank 1.1 • Science 77%

Reproducible analytical pipeline (RAP) for Python discrete-event simulation (DES) implementing the Stroke Capacity Planning Model from Monks et al. 2016.

girth • Rank 14.1 • Science 64%

An Item Response Theory Package for Python

func-adl.ast • Rank 11.1 • Science 67%

Construct hierarchical data queries using SQL-like concepts in python

geospacelab • Rank 11.1 • Science 67%

A python-based library to collect, manage, and visualize geospace data (e.g. OMNI, geomagnetic indices, EISCAT, DMSP, SWARM, TEC, AMPERE, etc.).

pubarchiver • Rank 6.1 • Science 72%

Package up microPublication.org and other journals for archiving into Portico and PMC

calamancy • Rank 11.1 • Science 67%

NLP pipelines for Tagalog using spaCy

trajectopy • Rank 11.1 • Science 67%

Trajectopy - Trajectory Evaluation in Python

freemocap • Rank 11.1 • Science 67%

Free Motion Capture for Everyone 💀✨

stim • Rank 21.1 • Science 57%

A fast stabilizer circuit library.

cutlass • Rank 24.1 • Science 54%

CUDA Templates for Linear Algebra Subroutines

tensorflow-recommenders • Rank 24.0 • Science 54%

TensorFlow Recommenders is a library for building recommender system models using TensorFlow.

nextline • Rank 11.0 • Science 67%

A Python code sequencer

LimitedLDLFactorizations • Rank 11.0 • Science 67%

Limited-Memory Factorization of Symmetric Matrices

ray-optics • Rank 11.0 • Science 67%

A web app for creating and simulating 2D geometric optical scenes, with a gallery of (interactive) demos.

DIVAnd • Rank 11.0 • Science 67%

DIVAnd performs an n-dimensional variational analysis of arbitrarily located observations

mbgdml • Rank 3.0 • Science 75%

Create, use, and analyze machine learning potentials within the many-body expansion framework.

pycid • Rank 11.0 • Science 67%

Library for graphical models of decision making, based on pgmpy and networkx

ANCOMBC • Rank 19.0 • Science 59%

Differential abundance (DA) and correlation analyses for microbial absolute abundance data

ImplicitDiscreteSolve • Rank 24.0 • Science 54%

High performance ordinary differential equation (ODE) and differential-algebraic equation (DAE) solvers, including neural ordinary differential equations (neural ODEs) and scientific machine learning (SciML)

dftbplus • Rank 11.0 • Science 67%

DFTB+ general package for performing fast atomistic simulations

https://github.com/cta-observatory/ctapipe • Rank 18.9 • Science 59%

Low-level data processing pipeline software for CTAO or similar arrays of Imaging Atmospheric Cherenkov Telescopes

PyNomaly — Peer-reviewed • Rank 18.9 • Science 59%

PyNomaly: Anomaly detection using Local Outlier Probabilities (LoOP). - Published in JOSS (2018)

ekonlpy • Rank 10.9 • Science 67%

Korean NLP Python Library for Economic Analysis

yascheduler • Rank 10.9 • Science 67%

Yet another cloud computing scheduler for the high-throughput cloud scientific simulations

sarek • Rank 10.9 • Science 67%

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

SolidStateDetectors • Rank 10.9 • Science 67%

Solid state detector field and charge drift simulation in Julia

tradeSeq • Rank 18.9 • Science 59%

TRAjectory-based Differential Expression analysis for SEQuencing data

pyqsp • Rank 13.9 • Science 64%

Python quantum signal processing

pixi • Rank 23.9 • Science 54%

Package management made easy

msmpathfinder • Rank 2.9 • Science 75%

Finding pathways from an Markov State Model

conflowgen • Rank 10.9 • Science 67%

A generator for synthetic container flows at maritime container terminals with a focus on yard operations

pyhelpers • Rank 10.9 • Science 67%

PyHelpers: An open-source toolkit for facilitating Python users' data manipulation tasks

clean_rawdata • Rank 5.9 • Science 72%

Cleaning Raw EEG data

pyfactxx • Rank 10.9 • Science 67%

Python bindings for upgraded FaCT++ description logic reasoner

lassonet • Rank 13.9 • Science 64%

Feature selection in neural networks

python-cmethods • Rank 10.9 • Science 67%

A collection of bias correction techniques written in Python - for climate sciences.

fracridge • Rank 10.8 • Science 67%

Fractional ridge regression

soundscapy • Rank 10.8 • Science 67%

A python library for soundscape assessments

clustermq • Rank 18.8 • Science 59%

R package to send function calls as jobs on LSF, SGE, Slurm, PBS/Torque, or each via SSH

catalyst • Rank 23.8 • Science 54%

Accelerated deep learning R&D

stone-soup • Rank 10.8 • Science 67%

A software project to provide the target tracking community with a framework for the development and testing of tracking algorithms.

TECA • Rank 10.8 • Science 67%

TECA, theToolkit for Extreme Climate Analysis, contains a collection of climate anlysis algorithms targetted at extreme event detection and analysis.

vol2birdR • Rank 10.8 • Science 67%

R package for the vol2bird algorithm: generate vertical profiles of biological signals in weather radar data

mdsuite • Rank 10.8 • Science 67%

A post-processing engine for particle simulations

scisort • Rank 10.8 • Science 67%

Sort files in research project folders in a scientific order

gpt-neox • Rank 13.8 • Science 64%

An implementation of model parallel autoregressive transformers on GPUs, based on the Megatron and DeepSpeed libraries

oxigraph • Rank 23.8 • Science 54%

SPARQL graph database

omniauth-identity • Rank 23.8 • Science 54%

A simple login and password strategy for OmniAuth.

pymbar • Rank 18.7 • Science 59%

Python implementation of the multistate Bennett acceptance ratio (MBAR)

artistools • Rank 13.7 • Science 64%

Plotting and analysis tools for ARTIS simulations

gms • Rank 10.7 • Science 67%

citeworks-cff • Rank 10.7 • Science 67%

Rust crates for citation formats and tools

numgrid • Rank 10.7 • Science 67%

Numerical integration grid for molecules.

babelstream • Rank 10.7 • Science 67%

STREAM, for lots of devices written in many programming models

bpbounds • Rank 10.7 • Science 67%

R package implementing nonparametric bounds for the ACE due to Balke and Pearl, JASA, 1997

stars-reproduce-wood-2021 • Rank 0.7 • Science 77%

Assessing the computational reproducibility of Wood et al. 2021 as part of STARS.

stars_reproduction_template • Rank 0.7 • Science 77%

Template repository for assessing the computational reproducibility of simulation studies on STARS

incompact3d_plunging_criterion • Rank 0.7 • Science 77%

Plunging condition for particle-laden flows over sloping bottoms: three-dimensional turbulence-resolving simulations

stars-ciw-example • Rank 0.7 • Science 77%

A treatment simulation model implemented in CiW

vectormultibang • Rank 0.7 • Science 77%

dispersal-meta-analysis • Rank 0.7 • Science 77%

Paper - Physiology can predict animal activity, exploration, and dispersal

stars_wp1_summary • Rank 0.7 • Science 77%

Summary of the eight computational reproducibility assessments conducted as part of STARS Work Package 1. These assessed discrete-event simulation papers with models in Python and R.

attribution_springna • Rank 0.7 • Science 77%

Climate drivers of the springtime North America cooling pattern

ecoopt • Rank 0.7 • Science 77%

chitoolbox • Rank 0.7 • Science 77%

MATLAB toolbox for handling hyperspectral data generated by SIMS, FTIR and Raman instruments.

cuquantum • Rank 20.7 • Science 57%

Home for cuQuantum Python & NVIDIA cuQuantum SDK C++ samples

https://github.com/bcallaway11/did • Rank 18.7 • Science 59%

Difference in Differences with Multiple Periods, website: https://bcallaway11.github.io/did

augmentedRCBD • Rank 10.7 • Science 67%

Analysis of Augmented Randomised Complete Block Design

tiktokapi • Rank 23.7 • Science 54%

The Unofficial TikTok API Wrapper In Python

timbertrek • Rank 10.6 • Science 67%

Explore and compare 1K+ accurate decision trees in your browser!

rsi • Rank 10.6 • Science 67%

Code for Retrieving STAC Information, addressing Repeated Spatial Infelicities and interfacing with Rsome Spectral Indices

martin • Rank 23.6 • Science 54%

Blazing fast and lightweight PostGIS, MBtiles and PMtiles tile server, tile generation, and mbtiles tooling.

pybigwig • Rank 18.6 • Science 59%

A python extension for quick access to bigWig and bigBed files

RootedTrees • Rank 10.6 • Science 67%

A collection of functionality around rooted trees to generate order conditions for Runge-Kutta methods in Julia for differential equations and scientific machine learning (SciML)

tensorflow-federated • Rank 23.6 • Science 54%

An open-source framework for machine learning and other computations on decentralized data.

cords • Rank 13.6 • Science 64%

Reduce end to end training time from days to hours (or hours to minutes), and energy requirements/costs by an order of magnitude using coresets and data selection.

MUMPS • Rank 10.6 • Science 67%

A Julia Interface to MUMPS

OpenML • Rank 18.6 • Science 59%

R package to interface with OpenML

qsharp • Rank 20.6 • Science 57%

Azure Quantum Development Kit, including the Q# programming language, resource estimator, and Quantum Katas

medusa-llm • Rank 13.6 • Science 64%

Medusa: Simple Framework for Accelerating LLM Generation with Multiple Decoding Heads

vosviewer-online • Rank 10.6 • Science 67%

VOSviewer Online is a tool for network visualization. It is a web-based version of VOSviewer, a popular tool for constructing and visualizing bibliometric networks.

genice • Rank 10.6 • Science 67%

A swiss army knife to generate proton-disordered ice structures.

deepforest • Rank 18.6 • Science 59%

Python Package for Airborne RGB machine learning

SEP — Peer-reviewed • Rank 18.6 • Science 59%

SEP: Source Extractor as a library - Published in JOSS (2016)

evodcinv • Rank 10.6 • Science 67%

Inversion of dispersion curves using Evolutionary Algorithms

shap • Rank 31.6 • Science 46%

A game theoretic approach to explain the output of any machine learning model.