differentialabundance • Rank 7.9 • Science 57%

Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

https://github.com/bowang-lab/bionic • Rank 5.9 • Science 59%

Biological Network Integration using Convolutions

python-novice-gapminder • Rank 10.9 • Science 54%

Plotting and Programming in Python

SimpleDiffEq • Rank 10.9 • Science 54%

Simple differential equation solvers in native Julia for scientific machine learning (SciML)

questionr • Rank 18.9 • Science 46%

R package to make surveys processing easier

SpatialFeatureExperiment • Rank 15.9 • Science 49%

Extension of SpatialExperiment with sf

methrix • Rank 15.8 • Science 49%

An R :package: for fast and flexible DNA methylation analysis

xsmiles • Rank 7.8 • Science 57%

A JupyterLab plugin implementing the XSMILES visualization

mp-units • Rank 10.8 • Science 54%

The quantities and units library for C++

df2onehot • Rank 10.8 • Science 54%

Convert a unstructured array into a stuctured dataframe.

biotrove • Rank 5.8 • Science 59%

NeurIPS 2024 Track on Datasets and Benchmarks (Spotlight)

bssm • Rank 15.8 • Science 49%

Bayesian Inference of State Space Models

specify7 • Rank 10.8 • Science 54%

An open-source platform for managing biological and geological collections.

ideal • Rank 15.8 • Science 49%

Interactive Differential Expression AnaLysis - DE made accessible and reproducible

https://github.com/astarvienna/skycalc_ipy • Rank 10.8 • Science 54%

iPython version of skycalc_cli

treeplot • Rank 10.8 • Science 54%

Plot tree based machine learning models

dgsh • Rank 7.8 • Science 57%

Shell supporting pipelines to and from multiple processes

queueing-tool • Rank 10.8 • Science 54%

Simulator for queueing networks written in Python

nbomicroscopymetadataspecs • Rank 5.8 • Science 59%

The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Group (https://www.bioimagingna.org/qc-dm-wg) for documenting microscopy experiments and assessing the quality of image data.

openwindscada • Rank 5.8 • Science 59%

list of open wind turbine data sets

meld • Rank 18.8 • Science 46%

Quantifying experimental perturbations at single cell resolution

edt • Rank 18.8 • Science 46%

Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.

SpaDES.tools • Rank 10.8 • Science 54%

Additional modelling tools for Spatial Discrete Event Simulation (SpaDES) module development

fuzzingbook • Rank 10.8 • Science 54%

Project page for "The Fuzzing Book"

oscar.jl • Rank 10.8 • Science 54%

A comprehensive open source computer algebra system for computations in algebra, geometry, and number theory.

twoaxistracking • Rank 7.7 • Science 57%

twoaxistracking is a python package for simulating two-axis tracking solar collectors, particularly self-shading.

medicalgpt • Rank 10.7 • Science 54%

MedicalGPT: Training Your Own Medical GPT Model with ChatGPT Training Pipeline. 训练医疗大模型，实现了包括增量预训练(PT)、有监督微调(SFT)、RLHF、DPO、ORPO、GRPO。

lingua-franca • Rank 10.7 • Science 54%

Intuitive concurrent programming in any language

decision • Rank 2.7 • Science 62%

Data-driven Efficient Configuration of Instruments by Scientific Intent for Operational Needs (DECISION)

rchart • Rank 2.7 • Science 62%

Comprehensive charting package to plot and compare data across scenarios, regions, sectors and time periods.

sog-bloomcast-ensemble • Rank 2.7 • Science 62%

Successor to the SoG-bloomcast project that uses an ensemble forecast.

phyluce • Rank 7.7 • Science 57%

software for UCE (and general) phylogenomics

suny-oswego-workshop-2024 • Rank 0.7 • Science 64%

Repository for my SUNY Oswego Workshop talk on April 9th and April 11th, 2024

emonet • Rank 0.7 • Science 64%

CNN-LSTM model for audio emotion detection in children with adverse childhood events.

anisotropio • Rank 0.7 • Science 64%

Toolkit for interfacing with shear-wave splitting codes.

@stdlib/utils-define-nonenumerable-read-only-property • Rank 20.7 • Science 44%

Define a non-enumerable read-only property.

@stdlib/assert-is-object-like • Rank 20.7 • Science 44%

Test if a value is object-like.

@stdlib/utils-escape-regexp-string • Rank 20.7 • Science 44%

Escape a regular expression string or pattern.

@stdlib/assert-is-boolean • Rank 20.7 • Science 44%

Test if a value is a boolean.

@stdlib/string-base-format-tokenize • Rank 20.7 • Science 44%

Tokenize a string into an array of string parts and format identifier objects.

@stdlib/array-float64 • Rank 20.7 • Science 44%

Float64Array.

@stdlib/assert-has-uint8array-support • Rank 20.7 • Science 44%

Detect native Uint8Array support.

@stdlib/assert-tools-array-function • Rank 20.7 • Science 44%

Return a function which tests if every element in an array passes a test condition.

@stdlib/assert-is-buffer • Rank 20.7 • Science 44%

Test if a value is a Buffer object.

@stdlib/assert-is-uint8array • Rank 20.7 • Science 44%

Test if a value is a Uint8Array.

@stdlib/process-cwd • Rank 20.7 • Science 44%

Return the current working directory.

@stdlib/assert-is-array • Rank 20.7 • Science 44%

Test if a value is an array.

@stdlib/assert-is-plain-object • Rank 20.7 • Science 44%

Test if a value is a plain object.

@stdlib/number-float64-base-to-float32 • Rank 20.7 • Science 44%

Convert a double-precision floating-point number to the nearest single-precision floating-point number.

@stdlib/array-uint16 • Rank 20.7 • Science 44%

Uint16Array.

@stdlib/assert-is-uint16array • Rank 20.7 • Science 44%

Test if a value is a Uint16Array.

@stdlib/assert-is-number • Rank 20.7 • Science 44%

Test if a value is a number.

@stdlib/regexp-function-name • Rank 20.7 • Science 44%

Return a regular expression to capture a function name.

@stdlib/assert-has-uint16array-support • Rank 20.7 • Science 44%

Detect native Uint16Array support.

@stdlib/fs-resolve-parent-path • Rank 20.7 • Science 44%

Resolve a path by walking parent directories.

@stdlib/assert-has-float64array-support • Rank 20.7 • Science 44%

Detect native Float64Array support.

@stdlib/constants-float64-ninf • Rank 20.7 • Science 44%

Double-precision floating-point negative infinity.

@stdlib/array-uint8 • Rank 20.7 • Science 44%

Uint8Array.

@stdlib/constants-uint8-max • Rank 20.7 • Science 44%

Maximum unsigned 8-bit integer.

@stdlib/constants-uint32-max • Rank 20.7 • Science 44%

Maximum unsigned 32-bit integer.

@stdlib/buffer-from-string • Rank 20.7 • Science 44%

Allocate a buffer containing a provided string.

@stdlib/string-lowercase • Rank 20.7 • Science 44%

Convert a string to lowercase.

@stdlib/cli-ctor • Rank 20.7 • Science 44%

Command-line interface.

@stdlib/process-read-stdin • Rank 20.7 • Science 44%

Read data from stdin.

@stdlib/fs-read-file • Rank 20.7 • Science 44%

Read the entire contents of a file.

torch-discounted-cumsum • Rank 7.7 • Science 57%

Fast Discounted Cumulative Sums in PyTorch

@stdlib/assert-is-integer • Rank 20.7 • Science 44%

Test if a value is a number having an integer value.

@stdlib/assert-is-nan • Rank 20.7 • Science 44%

Test if a value is NaN.

@stdlib/constants-array-max-typed-array-length • Rank 20.7 • Science 44%

Maximum length for a typed array.

@stdlib/utils-index-of • Rank 20.7 • Science 44%

Return the first index at which a given element can be found.

@stdlib/assert-has-int32array-support • Rank 20.7 • Science 44%

Detect native Int32Array support.

@stdlib/array-int32 • Rank 20.7 • Science 44%

Int32Array.

@stdlib/assert-is-int16array • Rank 20.7 • Science 44%

Test if a value is an Int16Array.

@stdlib/assert-is-uint8clampedarray • Rank 20.7 • Science 44%

Test if a value is a Uint8ClampedArray.

@stdlib/array-int8 • Rank 20.7 • Science 44%

Int8Array.

constants-int8-min • Rank 20.7 • Science 44%

Minimum signed 8-bit integer.

@stdlib/assert-has-uint8clampedarray-support • Rank 20.7 • Science 44%

Detect native Uint8ClampedArray support.

@stdlib/utils-keys • Rank 20.7 • Science 44%

Return an array of an object's own enumerable property names.

@stdlib/constants-int16-max • Rank 20.7 • Science 44%

Maximum signed 16-bit integer.

@stdlib/constants-int32-min • Rank 20.7 • Science 44%

Minimum signed 32-bit integer.

@stdlib/constants-int16-min • Rank 20.7 • Science 44%

Minimum signed 16-bit integer.

@stdlib/os • Rank 20.7 • Science 44%

Standard library OS utilities.

@stdlib/assert-is-error • Rank 20.7 • Science 44%

Test if a value is an Error object.

@stdlib/utils-copy • Rank 20.7 • Science 44%

Copy or deep clone a value to an arbitrary depth.

@stdlib/cli • Rank 20.7 • Science 44%

Command-line interface.

@stdlib/complex • Rank 20.7 • Science 44%

Complex numbers.

@stdlib/strided • Rank 20.7 • Science 44%

Strided.

feynml • Rank 10.7 • Science 54%

Feynman diagram markup language

Rdpack • Rank 18.7 • Science 46%

R package Rdpack provides functions and macros facilitating writing and management of R documentation.

metaheurustics-rs • Rank 10.7 • Science 54%

A comprehensive Rust library for metaheuristic optimization algorithms, providing efficient implementations of various optimization techniques

admur • Rank 7.7 • Science 57%

clugenr • Rank 7.7 • Science 57%

Multidimensional cluster generation in R

tcd • Rank 5.7 • Science 59%

Restor's ML pipeline for tree crown mapping in aerial images

letsr • Rank 5.7 • Science 59%

Tools for data handling and analysis in macroecology

torchrunx • Rank 10.7 • Science 54%

Easily run PyTorch on multiple GPUs & machines

landscapemetrics • Rank 15.6 • Science 49%

Landscape Metrics for Categorical Map Patterns 🗺️ in R

rrvgo • Rank 15.6 • Science 49%

Reduce + Visualize Gene Ontology

timeeval • Rank 15.6 • Science 49%

Evaluation Tool for Anomaly Detection Algorithms on Time Series

pylocron • Rank 10.6 • Science 54%

PyTorch implementations of recent Computer Vision tricks (ReXNet, RepVGG, Unet3p, YOLOv4, CIoU loss, AdaBelief, PolyLoss, MobileOne). Other additions: AdEMAMix

prism • Rank 2.6 • Science 62%

Programming Repository for In Situ Modeling