GitHub

https://github.com

Updated 6 months ago

leaflet β€’ Rank 38.9 β€’ Science 54%

πŸƒ JavaScript library for mobile-friendly interactive maps πŸ‡ΊπŸ‡¦

Updated 6 months ago

geocat-examples β€’ Rank 7.9 β€’ Science 85%

GeoCAT-examples provides a gallery of visualization examples demonstrating how to reproduce plots from NCL Applications scripts with packages in Python. It also includes some longer form examples demonstrating how to use functionality from various GeoCAT packages.

Updated 6 months ago

kangas β€’ Rank 15.9 β€’ Science 77%

🦘 Explore multimedia datasets at scale

Updated 6 months ago

cytoscape-cose-bilkent β€’ Rank 28.8 β€’ Science 64%

The CoSE layout for Cytoscape.js by Bilkent with enhanced compound node placement.

Scientific Software
Updated 6 months ago

naturf β€” Peer-reviewed β€’ Rank 7.8 β€’ Science 85%

naturf: a package for generating urban parameters for numerical weather modeling - Published in JOSS (2024)

Engineering (40%)
Scientific Software Β· Peer-reviewed
Updated 6 months ago

pypartmc β€’ Rank 15.8 β€’ Science 77%

Python (and C++) interface to PartMC with Jupyter/Python, Julia and Matlab examples

Updated 6 months ago

addchain β€’ Rank 25.7 β€’ Science 67%

Cryptographic Addition Chain Generation in Go

Updated 6 months ago

tractor.base β€’ Rank 15.7 β€’ Science 77%

Magnetic resonance imaging and tractography with R

Updated 6 months ago

autopytorch β€’ Rank 15.6 β€’ Science 77%

Automatic architecture search and hyperparameter optimization for PyTorch

Updated 6 months ago

jwst β€’ Rank 20.6 β€’ Science 72%

Python library for science observations from the James Webb Space Telescope

Updated 6 months ago

ggplot2 β€’ Rank 33.6 β€’ Science 59%

An implementation of the Grammar of Graphics in R

Updated 6 months ago

helm β€’ Rank 20.5 β€’ Science 72%

Holistic Evaluation of Language Models (HELM) is an open source Python framework created by the Center for Research on Foundation Models (CRFM) at Stanford for holistic, reproducible and transparent evaluation of foundation models, including large language models (LLMs) and multimodal models.

Updated 6 months ago

pythermalcomfort β€’ Rank 17.5 β€’ Science 75%

Package to calculate several thermal comfort indices (e.g. PMV, PPD, SET, adaptive) and convert physical variables.

Scientific Software
Updated 6 months ago

Fast k-medoids Clustering in Rust and Python β€” Peer-reviewed β€’ Rank 15.4 β€’ Science 77%

Fast k-medoids Clustering in Rust and Python - Published in JOSS (2022)

Artificial Intelligence and Machine Learning (37%)
Scientific Software Β· Peer-reviewed
Updated 6 months ago

tequila-basic β€’ Rank 15.4 β€’ Science 77%

A High-Level Abstraction Framework for Quantum Algorithms

Updated 6 months ago

kda β€’ Rank 7.4 β€’ Science 85%

Python package used for the analysis of biochemical kinetic diagrams.

Updated 6 months ago

py-aiger β€’ Rank 15.4 β€’ Science 77%

py-aiger: A python library for manipulating sequential and combinatorial circuits encoded using `and` & `inverter` gates (AIGs).

Updated 6 months ago

vizarr β€’ Rank 7.4 β€’ Science 85%

A minimal Zarr image viewer based on Viv.

Updated 6 months ago

metall β€’ Rank 7.4 β€’ Science 85%

Persistent memory allocator for data-centric analytics

Updated 6 months ago

DynamicPolynomials β€’ Rank 15.3 β€’ Science 77%

Multivariate polynomials implementation of commutative and non-commutative variables

Updated 6 months ago

quantlib β€’ Rank 15.3 β€’ Science 77%

The QuantLib C++ library

Updated 6 months ago

hatchet β€’ Rank 7.3 β€’ Science 85%

Graph-indexed Pandas DataFrames for analyzing hierarchical performance data

Scientific Software
Updated 6 months ago

NCDatasets.jl β€” Peer-reviewed β€’ Rank 15.3 β€’ Science 77%

NCDatasets.jl: a Julia package for manipulating netCDF data sets - Published in JOSS (2024)

Scientific Software
Updated 6 months ago

ROSS - Rotordynamic Open Source Software β€” Peer-reviewed β€’ Rank 15.3 β€’ Science 77%

ROSS - Rotordynamic Open Source Software - Published in JOSS (2020)

Mathematics (37%)
Scientific Software Β· Peer-reviewed
Updated 6 months ago

ccpp-scm β€’ Rank 7.3 β€’ Science 85%

CCPP Single Column Model

Updated 6 months ago

isofit β€’ Rank 15.3 β€’ Science 77%

Imaging Spectrometer Optimal FITting (ISOFIT) contains a set of routines and utilities for fitting surface, atmosphere and instrument models to imaging spectrometer data.

Scientific Software
Updated 6 months ago

climpred β€” Peer-reviewed β€’ Rank 15.2 β€’ Science 77%

climpred: Verification of weather and climate forecasts - Published in JOSS (2021)

Scientific Software Β· Peer-reviewed
Updated 6 months ago

lorikeet-genome β€’ Rank 15.2 β€’ Science 77%

Strain resolver for metagenomics

Updated 6 months ago

scikit-mol β€’ Rank 15.2 β€’ Science 77%

scikit-learn classes for molecular vectorization using RDKit

Updated 6 months ago

imageio β€’ Rank 33.2 β€’ Science 59%

Python library for reading and writing image data

Updated 6 months ago

xmip β€’ Rank 15.2 β€’ Science 77%

Analysis ready CMIP6 data in python the easy way with pangeo tools.

Updated 6 months ago

PowerSystems β€’ Rank 15.1 β€’ Science 77%

Data structures in Julia to enable power systems analysis. Part of the Scalable Integrated Infrastructure Planning Initiative at the National Renewable Energy Lab.

Updated about 1 month ago

gkwreg: An R Package for Generalized Kumaraswamy Regression Models for Bounded Data β€’ Rank 5.0 β€’ Science 87%

gkwreg: An R Package for Generalized Kumaraswamy Regression Models for Bounded Data - Published in JOSS (2026)

Updated 6 months ago

esm_tools β€’ Rank 14.9 β€’ Science 77%

Simple Infrastructure for Earth System Simulations

Updated 6 months ago

assuranceplatform β€’ Rank 6.9 β€’ Science 85%

Project to facilitate creation of Assurance Cases

Updated 6 months ago

vidore-benchmark β€’ Rank 14.9 β€’ Science 77%

Vision Document Retrieval (ViDoRe): Benchmark. Evaluation code for the ColPali paper.

Updated 6 months ago

fusion-blossom β€’ Rank 14.8 β€’ Science 77%

A fast minimum-weight perfect matching solver for quantum error correction

Updated 6 months ago

pylhe β€’ Rank 14.8 β€’ Science 77%

Lightweight Python interface to read Les Houches Event (LHE) files

Updated 6 months ago

qmflows β€’ Rank 14.8 β€’ Science 77%

This library tackles the construction and efficient execution of computational chemistry workflows

Updated 6 months ago

imaging-server-kit β€’ Rank 6.8 β€’ Science 85%

Deploy image processing algorithms in FastAPI servers and easily run them in Napari, QuPath, and more.

Updated 6 months ago

integron_finder β€’ Rank 6.8 β€’ Science 85%

Bioinformatics tool to find integrons in bacterial genomes

Earth and Environmental Sciences (40%)
Updated 6 months ago

poetry β€’ Rank 37.7 β€’ Science 54%

Python packaging and dependency management made easy

Updated 28 days ago

topoptlab: An Open and Modular Framework for Benchmarking and Research in Topology Optimization β€’ Rank 4.7 β€’ Science 87%

topoptlab: An Open and Modular Framework for Benchmarking and Research in Topology Optimization - Published in JOSS (2026)

Updated 6 months ago

ccompass β€’ Rank 6.7 β€’ Science 85%

A Neural Network Tool for Multi-Omic Classification of Cell Compartments

Updated 6 months ago

foyer β€’ Rank 14.7 β€’ Science 77%

A package for atom-typing as well as applying and disseminating forcefields

Updated 6 months ago

nomad-simulations β€’ Rank 14.7 β€’ Science 77%

A NOMAD plugin containing base sections for simulations.

Updated 6 months ago

shimmy β€’ Rank 24.7 β€’ Science 67%

An API conversion tool for popular external reinforcement learning environments

Updated 6 months ago

fastapi β€’ Rank 37.7 β€’ Science 54%

FastAPI framework, high performance, easy to learn, fast to code, ready for production

Updated 6 months ago

parpe β€’ Rank 6.6 β€’ Science 85%

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

Updated 6 months ago

decaylanguage β€’ Rank 14.6 β€’ Science 77%

Package to parse decay files, describe and convert particle decays between digital representations.

Updated 6 months ago

srai β€’ Rank 14.6 β€’ Science 77%

Spatial Representations for Artificial Intelligence - a Python library toolkit for geospatial machine learning focused on creating embeddings for downstream tasks

Updated 6 months ago

mep-django β€’ Rank 6.5 β€’ Science 85%

Shakespeare and Company Project - Python/Django web application

Updated 6 months ago

grizli β€’ Rank 14.4 β€’ Science 77%

Grizli: The "Grism redshift and line" analysis software

Updated 6 months ago

bmi-geotiff β€’ Rank 6.4 β€’ Science 85%

Access data (and metadata) from a GeoTIFF file through a BMI

Scientific Software
Updated 6 months ago

Metatheory.jl β€” Peer-reviewed β€’ Rank 14.3 β€’ Science 77%

Metatheory.jl: Fast and Elegant Algebraic Computation in Julia with Extensible Equality Saturation - Published in JOSS (2021)

Updated 6 months ago

geniza β€’ Rank 6.3 β€’ Science 85%

version 4.x of the Princeton Geniza Project

Updated 6 months ago

plotly.net β€’ Rank 24.3 β€’ Science 67%

Interactive graphing library for .NET programming languages :chart_with_upwards_trend:

Updated 6 months ago

pyleoclim β€’ Rank 14.3 β€’ Science 77%

Python Package for the Analysis of Paleoclimate Data. Documentation at

Updated 6 months ago

linien β€’ Rank 14.3 β€’ Science 77%

Spectroscopy lock application using RedPitaya

Updated 6 months ago

pyrealm β€’ Rank 14.3 β€’ Science 77%

Development of the pyrealm package, providing an integrated toolbox for modelling plant productivity, growth and demography using Python.

Updated 6 months ago

grnsight β€’ Rank 14.3 β€’ Science 77%

Web app and service for modeling and visualizing gene regulatory networks.

Scientific Software
Updated 6 months ago

ShakeNBreak β€” Peer-reviewed β€’ Rank 14.3 β€’ Science 77%

ShakeNBreak: Navigating the defect configurational landscape - Published in JOSS (2022)

Updated 6 months ago

rna-tools β€’ Rank 14.2 β€’ Science 77%

πŸ”§rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs @ http://rna-tools.rtfd.io web @ http://rna-tools.online

Updated 6 months ago

comb-spec-searcher β€’ Rank 14.2 β€’ Science 77%

a Python library for combinatorial exploration

Updated 6 months ago

ag2 β€’ Rank 27.2 β€’ Science 64%

AG2 (formerly AutoGen): The Open-Source AgentOS. Join us at: https://discord.gg/pAbnFJrkgZ