Scientific Software
Updated 4 months ago

Pyrodigal — Peer-reviewed • Rank 15.6 • Science 100%

Pyrodigal: Python bindings and interface to Prodigal, an efficient method for gene prediction in prokaryotes - Published in JOSS (2022)

Updated 4 months ago

rdflib • Rank 31.4 • Science 77%

RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.

Updated 4 months ago

georasters • Rank 13.8 • Science 77%

GeoRasters is a Python module that provides a fast and flexible tool to work with GIS raster files.

Updated 4 months ago

pyskani • Rank 10.7 • Science 77%

PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.

Updated 4 months ago

pyfastani • Rank 10.3 • Science 77%

Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

Updated 4 months ago

dedupe • Rank 23.6 • Science 62%

:id: A python library for accurate and scalable fuzzy matching, record deduplication and entity-resolution.

Updated 4 months ago

pybryt • Rank 12.9 • Science 64%

Python library for pedagogical auto-assessment

Updated 4 months ago

pymunk • Rank 27.0 • Science 44%

Pymunk is a easy-to-use pythonic 2d physics library that can be used whenever you need 2d rigid body physics from Python

Updated 4 months ago

cbsodata • Rank 14.5 • Science 54%

Unofficial Statistics Netherlands (CBS) open data API client for Python

Updated 4 months ago

pokapi • Rank 6.5 • Science 62%

Simple Python object-oriented interface for getting records from FOLIO

Updated 4 months ago

augur • Rank 11.7 • Science 54%

Python library and web service for Open Source Software Health and Sustainability metrics & data collection. You can find our documentation and new contributor information easily here: https://oss-augur.readthedocs.io/en/main/

Updated 4 months ago

wikes-toolkit • Rank 6.8 • Science 57%

a user-friendly toolkit for the Wiki-Entity-Summarization (WikES) project.

Updated 4 months ago

aeolus • Rank 9.6 • Science 54%

Analysis and visualisation of atmospheric model output powered by iris.

Updated 4 months ago

homelette • Rank 5.6 • Science 57%

A unified and modular interface to homology modelling software

Updated 4 months ago

wn • Rank 17.8 • Science 44%

A modern, interlingual wordnet interface for Python

Updated 4 months ago

itembed • Rank 4.7 • Science 44%

Python library to train shallow embeddings on unordered sequences

Updated 4 months ago

pycoupler • Science 67%

An LPJmL-Python interface for operating LPJmL in a Python environment and coupling it with Python models, programmes or simple programming scripts.

Updated 4 months ago

ontolearner • Science 67%

OntoLearner: A Modular Python Library for Ontology Learning with LLMs https://pypi.org/project/OntoLearner/

Updated 4 months ago

architxt • Science 44%

ArchiTXT is an open source Python library that transforms unstructured text into structured, searchable, and AI-ready data. It enables automated database generation and seamless data integration.

Updated 4 months ago

thread • Science 44%

A Python threading library extension ⭐️ Star to support our work!

Updated 4 months ago

ontoaligner • Science 67%

OntoAligner: A Python Toolkit for Ontology Alignment https://pypi.org/project/OntoAligner/