seaborn
seaborn: statistical data visualization - Published in JOSS (2021)
CMasher
CMasher: Scientific colormaps for making accessible, informative and 'cmashing' plots - Published in JOSS (2020)
OpenSpace
OpenSpace: An open-source astrovisualization framework - Published in JOSS (2017)
PVGeo
PVGeo: an open-source Python package for geoscientific visualization in VTK and ParaView - Published in JOSS (2019)
The plebeian Graph Library
The plebeian Graph Library: A WebGL based network visualisation and diagnostics package - Published in JOSS (2024)
multiqc
Aggregate results from bioinformatics analyses across many samples into a single report.
pygeohydro
A part of HyRiver software stack for accessing hydrology data through web services
vitessce
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
khroma
Colour Schemes for Scientific Data Visualization - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/khroma
forestplot
A Python package to make publication-ready but customizable coefficient plots.
efp-seq_browser
An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictographic" (eFP) based on its RPKM expression level.
spectrafit
📊📈🔬 SpectraFit is a command-line and Jupyter-notebook tool for quick data-fitting based on the regular expression of distribution functions.
pandas-ai
Chat with your database or your datalake (SQL, CSV, parquet). PandasAI makes data analysis conversational using LLMs and RAG.
xyz2graph
Convert an xyz file into a molecular graph and create a 3D visualisation of the graph.
outset
add zoom indicators, insets, and magnified panels to matplotlib/seaborn visualizations with ease!
pretzel
Javascript full-stack framework for Big Data visualisation and analysis
genome-spy
A visualization grammar and GPU-accelerated toolkit for genomic data
ml-hierarchical-confusion-matrix
Neo: Hierarchical Confusion Matrix Visualization (CHI 2022)
cloupy
CLOUPY IS NO LONGER SUPPORTED. PLEASE, SEE README. cloupy is a Python library for climatological data downloading, processing and visualizing. The main goal of the library is to help its author in writing a BA thesis. The library is well adapted to academic work - used data sources are reliable and graphs are easy to modify.
r-raster-vector-geospatial
Introduction to Geospatial Raster and Vector Data with R
tabula
tabula: An R Package for Analysis, Seriation, and Visualization of Archaeological Count Data - Published in JOSS (2019)
interactive_data_editor
A Software to interactively edit data in a graphical manner
teeplot
organize data visualization output, automatically picking meaningful names based on semantic plotting variables
comparative_ml_analysis_bioinformatics
A comprehensive analysis of gene expression data using machine learning techniques in Python and R, focusing on predictive modeling and data visualization
augur
Python library and web service for Open Source Software Health and Sustainability metrics & data collection. You can find our documentation and new contributor information easily here: https://oss-augur.readthedocs.io/en/main/
divbrowse
A web application for interactive visualization and exploratory data analysis of variant call matrices
pycirclize
Circular visualization in Python (Circos Plot, Chord Diagram, Radar Chart)
bluecloud-plankton
Spatial interpolation of plankton data using a neural network
fast_dash
Turn your Python functions into interactive apps! Fast Dash is an innovative way to deploy your Python code as interactive web apps with minimal changes.
higlass-scalable-insets
Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.
active-time-hypothesis2
The Active Time Hypothesis: Unveiling Temporal Dynamics in Quantum Entanglement
cancerpainclassifier
The project is in Beta, it will be a library containing modular pipeline tools to train different IA models in order to help the selection treatments for a patient suffering from cancer by reading some Pet scan
eplant_plant_efp
A data visualization tool to display tissue expression data for Arabidopsis thaliana
Pore2Chip
Pore2Chip: All-in-one python tool for soil microstructure analysis and micromodel design - Published in JOSS (2025)
prophitbet-soccer-bets-predictor
ProphitBet is a Machine Learning Soccer Bet prediction application. It analyzes the form of teams, computes match statistics and predicts the outcomes of a match using Advanced Machine Learning (ML) methods. The supported algorithms in this application are Neural Networks, Random Forests & Ensembl Models.
annodash
[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.
jupyter-scatter-tutorial
Jupyter Scatter Tutorial (that was first presented at SciPy '23)
teaching
Teaching Materials for Dr. Waleed A. Yousef
mapdrawingscriptforr
The script can be used to draw maps in R. It is also a reproduction script for maps that were created for two articles.
pyramid_chart
pyramid_chart is a stata user-generated package that produces a population pyramid.
nf-vuegen
nf-core module designed to automate report generation from outputs produced by other modules, subworkflows, or pipelines. VueGen creates reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications.
metaboheatmap
A R/Shiny based app for visualizing metabolomics data through heatmaps
iet-gpr
MATLAB function set for importing, processing, and plotting data from a GSSI-StructureScan Mini GPR
networks-of-roman-eleusis
A Digital Scholarship Tool for Studying Ancient Epigraphy
lenape-timetree
Source code for the CDH-sponsored Lunaapahkiing Princeton Timetree research project
digital-atlas
Interface to visualise connections between postcolonial intellectuals
datoviz
⚡ Datoviz: high-performance GPU rendering for scientific data visualization
vuegen
VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.
digimon-world-survey
Data and R-code for survey conducted about Digimon World 1
PRISMA
Generate checklists and flow diagrams based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA)
survey_dashboard
A dashboard build with bokeh to provide interative data visualization and exploration of survey results.
top-countries-mentioned-by-donald-trump
🌎 A data visualization project showing the top countries and diplomatic relations mentioned by Donald Trump in his presidential term from 2017 to 2020.（展示唐纳德·特朗普在其2017年至2020年总统任期内提及的国家外交关系的数据可视化。）
active-time-hypothesis
Reimagining Quantum Non-Locality: Simulating Entangled Systems with the Active Time Hypothesis
oscillation-adaptability
🔄 Discover how oscillations emerge as a mathematical necessity in complex systems. A rigorous framework proving C+A=1 with 10^-16 precision. 📊 Visualize adaptability landscapes & spectral fingerprints.
iwac-sentiment-analysis
Interactive visualization of sentiment analysis on the Islam West Africa Collection (IWAC) corpus, comparing ChatGPT vs Gemini with multilingual support and advanced filtering.
fern
A human-readable and modifiable data-expression language with minimal clutter.
rseb
An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.
hermes_stat_inf_data_vis
Statistical inference and data visualization for the humanities