Scientific Software
Updated 9 months ago

seaborn — Peer-reviewed • Rank 34.7 • Science 100%

seaborn: statistical data visualization - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 9 months ago

CMasher — Peer-reviewed • Rank 19.0 • Science 98%

CMasher: Scientific colormaps for making accessible, informative and 'cmashing' plots - Published in JOSS (2020)

Scientific Software
Updated 9 months ago

OpenSpace — Peer-reviewed • Rank 14.2 • Science 100%

OpenSpace: An open-source astrovisualization framework - Published in JOSS (2017)

Artificial Intelligence and Machine Learning (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 9 months ago

PVGeo — Peer-reviewed • Rank 13.4 • Science 100%

PVGeo: an open-source Python package for geoscientific visualization in VTK and ParaView - Published in JOSS (2019)

Scientific Software
Updated 9 months ago

The plebeian Graph Library — Peer-reviewed • Rank 3.4 • Science 100%

The plebeian Graph Library: A WebGL based network visualisation and diagnostics package - Published in JOSS (2024)

Engineering (33%)
Scientific Software · Peer-reviewed
Updated 9 months ago

multiqc • Rank 24.6 • Science 77%

Aggregate results from bioinformatics analyses across many samples into a single report.

Updated 9 months ago

pygeohydro • Rank 13.9 • Science 77%

A part of HyRiver software stack for accessing hydrology data through web services

Updated 9 months ago

chemplot • Rank 11.7 • Science 77%

A python package for chemical space visualization.

Updated 9 months ago

vitessce • Rank 21.2 • Science 67%

Vitessce is a visual integration tool for exploration of spatial single-cell experiments.

Updated 9 months ago

khroma • Rank 7.0 • Science 77%

Colour Schemes for Scientific Data Visualization - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/khroma

Updated 9 months ago

forestplot • Rank 14.0 • Science 67%

A Python package to make publication-ready but customizable coefficient plots.

Updated 9 months ago

efp-seq_browser • Rank 4.2 • Science 75%

An RNA-Seq data exploration tool that shows read map coverage of a gene of interest along with a coloured "electronic fluorescent pictographic" (eFP) based on its RPKM expression level.

Updated 9 months ago

spectrafit • Rank 11.6 • Science 67%

📊📈🔬 SpectraFit is a command-line and Jupyter-notebook tool for quick data-fitting based on the regular expression of distribution functions.

Updated 9 months ago

pandas-ai • Rank 24.5 • Science 54%

Chat with your database or your datalake (SQL, CSV, parquet). PandasAI makes data analysis conversational using LLMs and RAG.

Updated 9 months ago

outset • Rank 9.2 • Science 67%

add zoom indicators, insets, and magnified panels to matplotlib/seaborn visualizations with ease!

Updated 9 months ago

pretzel • Rank 8.3 • Science 67%

Javascript full-stack framework for Big Data visualisation and analysis

Updated 9 months ago

cloupy • Rank 6.7 • Science 67%

CLOUPY IS NO LONGER SUPPORTED. PLEASE, SEE README. cloupy is a Python library for climatological data downloading, processing and visualizing. The main goal of the library is to help its author in writing a BA thesis. The library is well adapted to academic work - used data sources are reliable and graphs are easy to modify.

Scientific Software
Updated 9 months ago

tabula — Peer-reviewed • Rank 4.7 • Science 67%

tabula: An R Package for Analysis, Seriation, and Visualization of Archaeological Count Data - Published in JOSS (2019)

Biology Engineering (40%)
Scientific Software · Peer-reviewed
Updated 9 months ago

teeplot • Rank 3.3 • Science 67%

organize data visualization output, automatically picking meaningful names based on semantic plotting variables

Updated 9 months ago

comparative_ml_analysis_bioinformatics • Rank 0.7 • Science 67%

A comprehensive analysis of gene expression data using machine learning techniques in Python and R, focusing on predictive modeling and data visualization

Updated 9 months ago

molplotly • Rank 13.4 • Science 54%

add-on to plotly which show molecule images on mouseover!

Updated 9 months ago

gosling • Rank 12.8 • Science 54%

A declarative interactive genomics visualization library for Python.

Updated 9 months ago

augur • Rank 11.7 • Science 54%

Python library and web service for Open Source Software Health and Sustainability metrics & data collection. You can find our documentation and new contributor information easily here: https://oss-augur.readthedocs.io/en/main/

Updated 9 months ago

divbrowse • Rank 6.6 • Science 57%

A web application for interactive visualization and exploratory data analysis of variant call matrices

Updated 9 months ago

bluecloud-plankton • Rank 1.4 • Science 54%

Spatial interpolation of plankton data using a neural network

Updated 9 months ago

calendarheatmap • Rank 8.7 • Science 44%

📅 Calendar heatmap inspired by GitHub contribution activity

Updated 9 months ago

fast_dash • Rank 4.8 • Science 44%

Turn your Python functions into interactive apps! Fast Dash is an innovative way to deploy your Python code as interactive web apps with minimal changes.

Updated 9 months ago

higlass-scalable-insets • Rank 7.0 • Science 18%

Scalable Insets for HiGlass: a new technique for interactively exploring and navigating large numbers of annotated patterns in multiscale visual spaces such as gigapixel images, matrices, or maps.

Updated 9 months ago

mapdrawingscriptforr • Science 67%

The script can be used to draw maps in R. It is also a reproduction script for maps that were created for two articles.

Updated 9 months ago

pyramid_chart • Science 44%

pyramid_chart is a stata user-generated package that produces a population pyramid.

Updated 9 months ago

digital-atlas • Science 67%

Interface to visualise connections between postcolonial intellectuals

Updated 9 months ago

barrio • Science 18%

A visual tool to compare and analyze nanoscale brain structures.

Updated 9 months ago

rseb • Science 67%

An R-package for daily tasks required to handle biological data as well as avoid re-coding of small functions for quick but necessary data management.

Updated 9 months ago

vuegen • Science 67%

VueGen automates the creation of reports from bioinformatics outputs, supporting formats like PDF, HTML, DOCX, ODT, PPTX, Reveal.js, Jupyter notebooks, and Streamlit web applications. Users simply provide a directory with output files and VueGen compiles them into a structured report.

Updated 9 months ago

hermes_stat_inf_data_vis • Science 67%

Statistical inference and data visualization for the humanities

Updated 9 months ago

hmsidr • Science 44%

Health Metrics and the Spread of Infectious Diseases with R (HMSIDR)

Scientific Software
Updated 9 months ago

Pore2Chip — Peer-reviewed • Science 98%

Pore2Chip: All-in-one python tool for soil microstructure analysis and micromodel design - Published in JOSS (2025)

Updated 9 months ago

prophitbet-soccer-bets-predictor • Science 54%

ProphitBet is a Machine Learning Soccer Bet prediction application. It analyzes the form of teams, computes match statistics and predicts the outcomes of a match using Advanced Machine Learning (ML) methods. The supported algorithms in this application are Neural Networks, Random Forests & Ensembl Models.

Updated 9 months ago

sankeymatic • Science 44%

Make Beautiful Flow Diagrams

Updated 9 months ago

numere • Science 67%

Framework for numerical computations, data analysis and visualisation

Updated 9 months ago

annodash • Science 67%

[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.

Updated 9 months ago

fern • Science 44%

A human-readable and modifiable data-expression language with minimal clutter.

Updated 9 months ago

data-visualization • Science 44%

Building interactive charts and visualizing data with Tableau, R and Python.

Updated 9 months ago

oscillation-adaptability • Science 44%

🔄 Discover how oscillations emerge as a mathematical necessity in complex systems. A rigorous framework proving C+A=1 with 10^-16 precision. 📊 Visualize adaptability landscapes & spectral fingerprints.

Updated 9 months ago

iwac-sentiment-analysis • Science 44%

Interactive visualization of sentiment analysis on the Islam West Africa Collection (IWAC) corpus, comparing ChatGPT vs Gemini with multilingual support and advanced filtering.

Updated 9 months ago

dashboard-prototype • Science 65%

Prototype data dashboard for Imageomics Data

Updated 9 months ago

iet-gpr • Science 44%

MATLAB function set for importing, processing, and plotting data from a GSSI-StructureScan Mini GPR

Updated 9 months ago

quant-fun-v2 • Science 18%

Fundamentals of Quantitative Analysis

Updated 9 months ago

PRISMA • Science 57%

Generate checklists and flow diagrams based on the Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA)

Updated 9 months ago

survey_dashboard • Science 44%

A dashboard build with bokeh to provide interative data visualization and exploration of survey results.

Updated 9 months ago

leaflet-dataclassification • Science 57%

Single-step data classification, symbology and legend creation for GeoJSON data powered thematic maps

Updated 9 months ago

syndat • Science 75%

Synthetic data quality evaluation & visualization

Updated 9 months ago

cer-beans • Science 54%

CER ⋅ BEANS: Community Engaged Research Balanced Expressions and Assessments with Nuanced Scores

Updated 9 months ago

active-time-hypothesis • Science 44%

Reimagining Quantum Non-Locality: Simulating Entangled Systems with the Active Time Hypothesis

Updated 9 months ago

active-time-hypothesis2 • Science 44%

The Active Time Hypothesis: Unveiling Temporal Dynamics in Quantum Entanglement

Updated 9 months ago

internet-visualization • Science 54%

Source code of "Towards an interactive visualization of the Internet".

Updated 9 months ago

pricepoints • Science 44%

Price Points research, data analyses, and packages. Informational only, not official Turquoise Health products

Updated 9 months ago

loneliness • Science 18%

Data visualization hall of fame project

Updated 9 months ago

sus-analysis-toolkit • Science 67%

A web-based analysis toolkit for the System Usability Scale providing calculation, plotting, interpretation and contextualization utility.