Updated 9 months ago

methylseq • Rank 8.7 • Science 67%

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

Updated 9 months ago

macrophage-regulation • Rank 1.1 • Science 67%

Integrated time-series analysis and high-content CRISPR screening delineate the dynamics of macrophage immune regulation

Updated 9 months ago

chromswitch • Rank 11.9 • Science 13%

An R/Bioconductor package for detecting chromatin state switches

Updated 9 months ago

https://github.com/broadinstitute/genepy • Rank 8.9 • Science 10%

Genepy is an open source utils package covering a range of useful functions for large scale genomics data analysis in python

Updated 9 months ago

sammyseq • Science 67%

Pipeline for Sequential Analysis of MacroMolecules accessibilitY sequencing (SAMMY-seq) data, to analyze chromatin state.

Updated 9 months ago

segway • Science 44%

Application for semi-automated genomic annotation.

Updated 9 months ago

motifpeeker • Science 23%

Benchmark Epigenomic Profiling Methods with Motif Enrichment as Key Metric