anndata bioinformatics data-science machine-learning scanpy scverse transcriptomics

Engineering (40%)

anndata data-analysis genomics mudata multi-omics multimodal-omics-analysis muon scverse

anndata cite-seq mudata multi-omics multimodal-data multimodal-omics-analysis muon scanpy scatac-seq scrna-seq scverse

anndata bioinformatics data-science machine-learning python scanpy scverse transcriptomics visualize-data

cite-seq deep-generative-model deep-learning human-cell-atlas scrna-seq scverse single-cell-genomics single-cell-rna-seq variational-autoencoder variational-bayes

anndata julia mudata multi-omics muon omics scverse single-cell

clustree pyclustree scverse single-cell

clustering dimensionality-reduction integration nextflow nf-core pipeline quality-control scverse single-cell workflow

image-anal pathology pathoplex scverse spatial-proteomics spatial-statistics

anndata bioinformatics deseq2 python rna rna-seq scverse tximport