tissueloc
tissueloc: Whole slide digital pathology image tissue localization - Published in JOSS (2019)
wholeslidedata
A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
monai-deploy
MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.
https://github.com/biomedsciai/histocartography
A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.
ailcap
An implementation of deep learning segmentation models in digital pathology field
cytologick
(WIP) PyTorch/TensorFlow powered semantic segmentation software for cytological slides
spatiomic
A Python package for unsupervised analysis of spatial (prote)omics data.
histopathologyatlas.github.io
Histopathology Atlas contains whole slide images of various diseases