Scientific Software
Updated 9 months ago

tissueloc — Peer-reviewed • Rank 5.0 • Science 93%

tissueloc: Whole slide digital pathology image tissue localization - Published in JOSS (2019)

Updated 9 months ago

wholeslidedata • Rank 12.8 • Science 44%

A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

Updated 9 months ago

monai-deploy • Rank 8.0 • Science 36%

MONAI Deploy aims to become the de-facto standard for developing, packaging, testing, deploying and running medical AI applications in clinical production.

Updated 9 months ago

https://github.com/biomedsciai/histocartography • Rank 8.1 • Science 33%

A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.

Updated 9 months ago

template • Science 67%

template for pathology atlas repositories

Updated 9 months ago

ailcap • Science 44%

An implementation of deep learning segmentation models in digital pathology field

Updated 9 months ago

spatiomic • Science 67%

A Python package for unsupervised analysis of spatial (prote)omics data.

Updated 9 months ago

histopathologyatlas.github.io • Science 26%

Histopathology Atlas contains whole slide images of various diseases