Projects

Updated 8 months ago

A unifying bioinformatics framework for organelle proteomics

bioconductor proteomics proteomics-data r spatial-proteomics visualisation

Updated 8 months ago

A Python package for unsupervised analysis of spatial (prote)omics data.

image-anal pathology pathoplex scverse spatial-proteomics spatial-statistics

Updated 8 months ago

Finding surprising needles (=genes) in haystacks (=single cell transcriptome data).

bioinformatics cite-seq pseudotime r scatac-seq single-cell spatial-proteomics spatial-transcriptomics transcriptomics

Updated 8 months ago

Nextflow version of Sopa - spatial omics pipeline and analysis

nextflow nf-core pipeline segmentation spatial-omics spatial-proteomics spatial-transcriptomics spatialdata workflow

ecosyste.ms