Updated 6 months ago

MuData • Rank 12.5 • Science 77%

MuData-compatible storage for bioconductor's MultiAssayExperiment

Scientific Software
Updated 6 months ago

OpenOmics — Peer-reviewed • Rank 6.7 • Science 77%

OpenOmics: A bioinformatics API to integrate multi-omics datasets and interface with public databases. - Published in JOSS (2021)

Mathematics Sociology Biology
Scientific Software · Peer-reviewed
Updated 6 months ago

hicar • Rank 4.9 • Science 67%

Pipeline for HiCAR data, a robust and sensitive multi-omic co-assay for simultaneous measurement of transcriptome, chromatin accessibility and cis-regulatory chromatin contacts.

Updated 6 months ago

MOFA2 • Rank 19.5 • Science 23%

Multi-Omics Factor Analysis

Updated 6 months ago

timeomics • Rank 4.6 • Science 36%

Time-Course Multi-Omics data integration

Updated 6 months ago

klic • Rank 7.2 • Science 33%

R package for KLIC: Kernel Learning Integrative Clustering

Updated 6 months ago

cancerg0arrest • Science 49%

Evaluation of cell cycle arrest from transcriptomics data.

Updated 6 months ago

bd-lithium • Science 54%

A collection of source codes for network-based multi-omics analysis using integrated genome-wide association studies (GWAS) and transcriptomic data to identify genetic contribution into lithium response in patients with bipolar disorder (BD).

Updated 6 months ago

mudataseurat • Science 67%

.h5mu files interface for Seurat