PySPOD — Peer-reviewed • Rank 11.3 • Science 59%

PySPOD: A Python package for Spectral Proper Orthogonal Decomposition (SPOD) - Published in JOSS (2021)

leaflet-providersesp • Rank 3.3 • Science 67%

An extension to Leaflet that contains configurations for various free WMS (Web Map Service) and WMTS (Web Map Tile Service) providers of Spain (IDErioja, PNOA, IGN base, Catastro, etc), from Spanish mapping agencies.

numerical_methods_introduction • Rank 3.3 • Science 67%

A set of Jupyter Notebooks demonstrating various numerical methods in Python.

metagenomics-workshop • Rank 6.3 • Science 64%

Metagenomics Workshop Overview

imitation • Rank 19.3 • Science 51%

Clean PyTorch implementations of imitation and reward learning algorithms

pydarnio • Rank 11.3 • Science 59%

Python Library for read in SuperDARN data

liburing • Rank 16.3 • Science 54%

Library providing helpers for the Linux kernel io_uring support

ucall • Rank 16.3 • Science 54%

Web Serving and Remote Procedure Calls at 50x lower latency and 70x higher bandwidth than FastAPI, implementing JSON-RPC & REST over io_uring ☎️

ace • Rank 11.3 • Science 59%

Ai2 Climate Emulator

scFeatures • Rank 13.3 • Science 57%

multiscale_spatial_image • Rank 16.3 • Science 54%

Generate a multiscale, chunked, multi-dimensional spatial image data structure that can serialized to OME-NGFF.

scatterd • Rank 16.3 • Science 54%

Scatterd is a Python package for easy and fast creation of beautiful scatter plots.

teeplot • Rank 3.3 • Science 67%

organize data visualization output, automatically picking meaningful names based on semantic plotting variables

@stdlib/math-base-special-cinv • Rank 3.3 • Science 67%

Compute the inverse of a complex number.

myfempy • Rank 3.3 • Science 67%

Myfempy is a python package based on finite element method to multiphysics analysis.

shockhash • Rank 3.3 • Science 67%

Towards Optimal-Space Minimal Perfect Hashing Beyond Brute-Force

quantumaudio • Rank 3.3 • Science 67%

Tools, circuits, examples & applications of Quantum Representations of Audio in qubit systems

structuralcoexistence • Rank 3.3 • Science 67%

Shiny app to explore structural approach to species coexistence

compoda • Rank 3.3 • Science 67%

Simplex space operations for compositional data implemented in Python.

DiffEqNoiseProcess • Rank 16.3 • Science 54%

A library of noise processes for stochastic systems like stochastic differential equations (SDEs) and other systems that are present in scientific machine learning (SciML)

climaland.jl • Rank 13.2 • Science 57%

Clima's Land Model

BesselK • Rank 6.2 • Science 64%

An AD-compatible modified second-kind Bessel function.

https://github.com/arklumpus/treenode • Rank 11.2 • Science 59%

Read, write and manipulate phylogenetic trees

cdr-database • Rank 6.2 • Science 64%

reports on carbon removal projects and technologies

psyke • Rank 13.2 • Science 57%

PSyKE: a (Python) platform for symbolic knowledge extraction

alz-predict-roivsnonroi • Rank 3.2 • Science 67%

Deep learning pipeline for efficiently predict Alzheimer's Disease from ADNI & OASIS

fair-dash • Rank 3.2 • Science 67%

A simple static site generator for getting repo statistics.

dea_seurat • Rank 3.2 • Science 67%

A Snakemake workflow and MrBiomics module for performing differential expression analyses (DEA) on (multimodal) sc/snRNA-seq data powered by the R package Seurat.

humolire • Rank 3.2 • Science 67%

HuMoLiRe is a Pedestrian Dead-Reckoning Particle Filter Map-aided system that leverages human motion likelihood in indoor spaces to estimate their position. This repository is the dataset and software published with its paper.

hail • Rank 24.2 • Science 46%

Cloud-native genomic dataframes and batch computing

monet • Rank 8.2 • Science 62%

The Model and ObservatioN Evaluation Toolkit (MONET)

pysyft • Rank 24.2 • Science 46%

Perform data science on data that remains in someone else's server

Convex • Rank 16.2 • Science 54%

A Julia package for disciplined convex programming

pmdarima • Rank 26.2 • Science 44%

A statistical library designed to fill the void in Python's time series analysis capabilities, including the equivalent of R's auto.arima function.

rainette • Rank 11.2 • Science 59%

R implementation of the Reinert text clustering method

https://github.com/kevinshen56714/emc-pypi • Rank 11.2 • Science 59%

Python interface for Enhanced Monte Carlo (EMC)

Emporium • Rank 3.2 • Science 67%

This package provides a selection of useful "scripts" for the project maintainer. Useful for automated changes to large collections of packages.

enhancing_reaxff • Rank 3.2 • Science 67%

Jupyter notebooks used for retraining the ReaxFF force field for the inorganic compound LiF.

nextjstemplate • Rank 3.2 • Science 67%

Biodesign Digital Health NextJS Template

g-tomo • Rank 3.2 • Science 67%

G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. Extraction of 1d profiles and 2d maps (slices)

bikenwgaps • Rank 3.2 • Science 67%

Automated detection of gaps in bicycle networks: source code for IPDC procedure

ceresfit • Rank 3.2 • Science 67%

Linear Regression for data set with correlated or uncorrelated uncertainties in both axes.

https://github.com/cda-tum/mnt-bench • Rank 3.2 • Science 67%

MNT Bench - An MNT tool for Benchmarking FCN circuits

https://github.com/biocore/qurro • Rank 11.2 • Science 59%

Visualize differentially ranked features (taxa, metabolites, ...) and their log-ratios across samples

nexmon • Rank 11.2 • Science 59%

The C-based Firmware Patching Framework for Broadcom/Cypress WiFi Chips that enables Monitor Mode, Frame Injection and much more

nmma • Rank 11.2 • Science 59%

A pythonic library for probing nuclear physics and cosmology with multimessenger analysis

nab • Rank 11.2 • Science 59%

The Numenta Anomaly Benchmark

sigfig • Rank 16.1 • Science 54%

This is the sigfig Python package used for rounding numbers (with expected results)

openstef • Rank 16.1 • Science 54%

Automated Machine Learning pipelines. Builds the Open Short Term Energy Forecasting package.

ExaAdmm • Rank 6.1 • Science 64%

Julia implementation of ADMM solver on multiple GPUs

soniscope-jupyter • Rank 5.1 • Science 65%

jupyter notebook widget with a scatter plot and an interactive lens to enable interactive sonification

rogue • Rank 11.1 • Science 59%

Identify rogue taxa in phylogenetic trees within R

mapSpain • Rank 13.1 • Science 57%

R package with the administrative boundaries of Spain, including CCAA, provinces and municipalities

alpaka • Rank 11.1 • Science 59%

Abstraction Library for Parallel Kernel Acceleration :llama:

geos-chem • Rank 11.1 • Science 59%

GEOS-Chem "Science Codebase" repository. Contains GEOS-Chem science routines, run directory generation scripts, and interface code. This repository is used as a submodule within the GCClassic and GCHP wrappers, as well as in other modeling contexts (external ESMs).

stplanr • Rank 21.1 • Science 49%

Sustainable transport planning with R

impact • Rank 3.1 • Science 67%

IMPaCT: Interval MDP Parallel Construction for Controller Synthesis of Large-Scale Stochastic Systems. IMPaCT is an open-source software tool for the parallelized verification and controller synthesis of large-scale stochastic systems using interval Markov chains (IMCs) and interval Markov decision processes (IMDPs).

https://github.com/SciML/Optimization.jl • Rank 11.1 • Science 59%

Mathematical Optimization in Julia. Local, global, gradient-based and derivative-free. Linear, Quadratic, Convex, Mixed-Integer, and Nonlinear Optimization in one simple, fast, and differentiable interface.

mmhuman3d • Rank 16.1 • Science 54%

OpenMMLab 3D Human Parametric Model Toolbox and Benchmark

netplotbrain • Rank 11.1 • Science 59%

A package to create simple 3D network visualizations on a brain.

ckanext-statistics • Rank 8.1 • Science 62%

A CKAN extension for accessing download statistics

ckanext-list • Rank 8.1 • Science 62%

A CKAN extension that adds a list view for resources.

sygma • Rank 3.0 • Science 67%

A python library for prediction of drug metabolites

qualle • Rank 3.0 • Science 67%

Implementation of Qualle Framework as proposed in the paper "Content-Based Quality Estimation for Automatic Subject Indexing of Short Texts under Precision and Recall Constraints" and accompanying source code by Martin Toepfer and Christin Seifert.

distance-estimation • Rank 3.0 • Science 67%

Distance Estimation for Estimating Animal Abundance

com.github.spinalhdl:spinalhdl-all_2.11 • Rank 16.0 • Science 54%

Scala based HDL

NN-SVG — Peer-reviewed • Rank 11.0 • Science 59%

NN-SVG: Publication-Ready Neural Network Architecture Schematics - Published in JOSS (2019)

dendextend • Rank 21.0 • Science 49%

Extending R's Dendrogram Functionality

JuliaCall — Peer-reviewed • Rank 21.0 • Science 49%

JuliaCall: an R package for seamless integration between R and Julia - Published in JOSS (2019)

deepcell • Rank 16.0 • Science 54%

Deep Learning Library for Single Cell Analysis

tf-keras-vis • Rank 16.0 • Science 54%

Neural network visualization toolkit for tf.keras

casile • Rank 16.0 • Science 54%

The CaSILE toolkit, a book publishing workflow employing SILE and other wizardry.

rsparse • Rank 13.0 • Science 57%

A Rust library for solving sparse linear systems using direct methods.

croptimizr • Rank 6.0 • Science 64%

Estimate Crop Models' parameters

praat-parselmouth • Rank 21.0 • Science 49%

Praat in Python, the Pythonic way

paper_viceconte_2021_ral_adherent • Rank 3.0 • Science 67%

radius_clustering • Rank 3.0 • Science 67%

Source code repository of the Radius clustering python package.

AtiyahBott • Rank 3.0 • Science 67%

An implementation of the Atiyah-Bott formula for the moduli space of genus 0 stable maps.

goodness-of-pronunciation-pipelines-for-oov-problem • Rank 3.0 • Science 67%

Goodness of Pronunciation Pipelines for OOV Removal

moana-qc • Rank 3.0 • Science 67%

caltechthesis • Rank 3.0 • Science 67%

A test version of CaltechTHESIS on InvenioRDM

vor_cerebellum • Rank 3.0 • Science 67%

Cerebellum learning to perform the VOR.

benchmarks-acoustic-propagation • Rank 3.0 • Science 67%

Coupled model development for acoustic propagation through multilayer systems for particle-velocity sensors

torsiondrive • Rank 6.0 • Science 64%

Dihedral scanner with wavefront propagation

nlesc-flamingo • Rank 6.0 • Science 64%

Computation and filtering of molecular properties

hyper2 • Rank 16.0 • Science 54%

org.webjars.npm:nearley • Rank 13.0 • Science 57%

📜🔜🌲 Simple, fast, powerful parser toolkit for JavaScript.

https://github.com/broadinstitute/tangram • Rank 16.0 • Science 54%

Spatial alignment of single cell transcriptomic data.

ckanext-iiif • Rank 8.0 • Science 62%

CKAN IIIF extension

mlfit • Rank 11.0 • Science 59%

Implementation of algorithms that extend IPF to nested structures

golem • Rank 6.0 • Science 64%

GOLEM is a numerical simulator for modelling coupled Thermo-Hydro-Mechanical processes in faulted geothermal reservoirs.

ctlearn • Rank 11.0 • Science 59%

Deep Learning for IACT Event Reconstruction

btlemap • Rank 5.9 • Science 64%

Nmap for Bluetooth Low Energy

ieee118_power_flow_data • Rank 2.9 • Science 67%

Data pipeline to build power flow cases of IEEE-118 power system

sichash • Rank 2.9 • Science 67%

A (Minimal) Perfect Hash Function based on irregular cuckoo hashing, retrieval, and overloading.

rockyml • Rank 2.9 • Science 67%

⛰️ RockyML - A High-Performance Scientific Computing Framework for Non-smooth Machine Learning Problems

choclo • Rank 12.9 • Science 57%

Kernel functions for your geophysical models

leaflet-velocity • Rank 17.9 • Science 52%

Visualise velocity data on a leaflet layer

lsstdesc-weaklensingdeblending • Rank 5.9 • Science 64%

Weak lensing fast simulations and analysis of blended objects.

eduos-rs • Rank 7.9 • Science 62%

A teaching operating system written in Rust