GitHub
https://github.com/astropy/pyvo
An Astropy affiliated package providing access to remote data and services of the Virtual Observatory (VO) using Python.
trisicell
Scalable tumor phylogeny inference and validation from single-cell RNA or DNA data
https://github.com/cma-es/moarchiving
Multiobjective nondominated archive classes with up to four objectives
HODLRlib
HODLRlib: A Library for Hierarchical Matrices - Published in JOSS (2019)
itkwidgets
An elegant Python interface for visualization on the web platform to interactively generate insights into multidimensional images, point sets, and geometry.
https://github.com/common-workflow-language/cwlviewer
A web application to view and share Common Workflow Language workflows
ggtreeExtra
:lemon: Add Geom Layers On Circular Or Other Layout Tree Of “ggtree”
TopoPlots
Makie topo plot recipes, for neuro-science, geo plots and anyone needing surface plots from unstructured data
lc0
Open source neural network chess engine with GPU acceleration and broad hardware support.
https://github.com/alexandrovlab/sigprofilertopography
SigProfilerTopography allows evaluating the effect of chromatin organization, histone modifications, transcription factor binding, DNA replication, and DNA transcription on the activities of different mutational processes. SigProfilerTopography elucidates the unique topographical characteristics of mutational signatures.
yegor256/cam
Classes and Metriсs (CaM): a dataset of Java classes from public open-source GitHub repositories
caltechlibrary/waystation
Automatically archive your repository's GitHub Pages in the Wayback Machine.
SciMLTutorials
Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.
embomicrocom
Metabolic modeling tutorial for EMBO practical course: Metabolite and species dynamics in microbial communities 2022
nolds
Nonlinear measures for dynamical systems (based on one-dimensional time series)
cuda-quantum
C++ and Python support for the CUDA Quantum programming model for heterogeneous quantum-classical workflows
cna
Covarying neighborhood analysis (CNA) is a method for finding structure in- and conducting association analysis with multi-sample single-cell datasets.
HarmonicBalance
A Julia package for solving nonlinear differential equations using the harmonic balance method.
composable-kernel
Composable Kernel: Performance Portable Programming Model for Machine Learning Tensor Operators
@stdlib/stats-base-stdevpn
Calculate the standard deviation of a strided array using a two-pass algorithm.
nlopt
library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization
pymaro
Multi-Agent Resource Optimization (MARO) platform is an instance of Reinforcement Learning as a Service (RaaS) for real-world resource optimization problems.
diffsims
An open-source Python library providing utilities for simulating diffraction
py-torchbenchmark
TorchBench is a collection of open source benchmarks used to evaluate PyTorch performance.
igor
R package to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, provided by the Correlates of War Project https://correlatesofwar.org/
nucml
End-to-end python-based supervised machine learning pipeline for ML-augmented nuclear data evaluation.
BlueCarbon
Estimation of organic carbon stocks and sequestration rates from soil/sediment cores from blue carbon ecosystems
scibasic
sciBASIC# is a kind of dialect language which is derive from the native VB.NET language, and written for the data scientist.
vision_transformers_explained
This folder of code contains code and notebooks to supplement the "Vision Transformers Explained" series published on Towards Data Science written by Skylar Callis.
Philentropy
Philentropy: Information Theory and Distance Quantification with R - Published in JOSS (2018)
@capawesome-team/capacitor-android-battery-optimization
⚡️ Community plugins for Capacitor. Supports Android, iOS and the Web.
sombrero
A next-generation conjugate gradient benchmark from computational particle physics
@stdlib/blas-ext-base-dsumpw
Calculate the sum of double-precision floating-point strided array elements using pairwise summation.
idpflex
idpflex: Analysis of Intrinsically Disordered Proteins by Comparing Simulations to Small Angle Scattering Experiments - Published in JOSS (2018)
https://github.com/antsx/antspy
A fast medical imaging analysis library in Python with algorithms for registration, segmentation, and more.
https://github.com/google-research/retvec
RETVec is an efficient, multilingual, and adversarially-robust text vectorizer.
ads2inspire
Replace ADS citations with the appropriate INSPIRE ones in latex and bibtex
cam2bev
TensorFlow Implementation for Computing a Semantically Segmented Bird's Eye View (BEV) Image Given the Images of Multiple Vehicle-Mounted Cameras.
eyepy
A python package to read, analyse and visualize OCT and fundus data from various sources.
classy-classification
This repository contains an easy and intuitive approach to few-shot classification using sentence-transformers or spaCy models, or zero-shot classification with Huggingface.
palmerpenguins
A great intro dataset for data exploration & visualization (alternative to iris).
ParameterizedFunctions
A simple domain-specific language (DSL) for defining differential equations for use in scientific machine learning (SciML) and other applications
map-closures
Effectively Detecting Loop Closures using Point Cloud Density Maps
bim2rdf
This software tool automatically creates the semantic model that building system applications need by leveraging data that exists in existing practice building design tools.
single-cell-training
SIB course on single cell transcriptomics by mostly using the Seurat pipeline
polyaxon
MLOps Tools For Managing & Orchestrating The Machine Learning LifeCycle