GitHub
gymnasium
An API standard for single-agent reinforcement learning environments, with popular reference environments and related utilities (formerly Gym)
downstream
downstream provides efficient, constant-space implementations of stream curation algorithms.
https://github.com/alan-turing-institute/clevercsv
CleverCSV is a Python package for handling messy CSV files. It provides a drop-in replacement for the builtin CSV module with improved dialect detection, and comes with a handy command line application for working with CSV files.
spectrafit
📊📈🔬 SpectraFit is a command-line and Jupyter-notebook tool for quick data-fitting based on the regular expression of distribution functions.
ipal_evaluate
Intrusion Detection Evaluation - A framework to evalute (Industrial) Intrusion Detection Systems.
cbssuitabilityhaiti
Data for a sanitation zoning assessment prepared for the city of Cap Haitien, Haiti. The package combines two datasets used for an analysis of the suitability of container-based sanitation (CBS)
alkahest
Pre-Processing XY Data from Experimental Methods - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/alkahest
rfaas
rFaaS: a high-performance FaaS platform with RDMA acceleration for low-latency invocations.
proteinworkshop
Benchmarking framework for protein representation learning. Includes a large number of pre-training and downstream task datasets, models and training/task utilities. (ICLR 2024)
bootstrapping-for-bqsr
Bootstrap a variant resource for non-model organisms that lack known variant databases. This is to enable GATK Base Quality Score Recalibration (BQSR) to be performed for improved variant calls.
cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
en-transformer
Implementation of E(n)-Transformer, which incorporates attention mechanisms into Welling's E(n)-Equivariant Graph Neural Network
instanovo
De novo peptide sequencing with InstaNovo: Accurate, database-free peptide identification for large scale proteomics experiments
pysplishsplash
SPlisHSPlasH is an open-source library for the physically-based simulation of fluids.
jsonargparse
Implement minimal boilerplate CLIs derived from type hints and parse from command line, config files and environment variables
pandas-ai
Chat with your database or your datalake (SQL, CSV, parquet). PandasAI makes data analysis conversational using LLMs and RAG.
cytoscape-autopan-on-drag
A Cytsocape.js extension to automatically pan when nodes are out of canvas bounds
https://github.com/chains-project/dirty-waters
automatically detect software supply chain smells and issues http://arxiv.org/pdf/2410.16049
SciMLBenchmarks
Scientific machine learning (SciML) benchmarks, AI for science, and (differential) equation solvers. Covers Julia, Python (PyTorch, Jax), MATLAB, R
overlap
Exact calculation of the overlap volume and area of spheres and mesh elements
FrankWolfe
Julia implementation for various Frank-Wolfe and Conditional Gradient variants
https://github.com/bluebrain/diameter-synthesis
Synthesize diameters of neuronal morphologies
orthoseg
OrthoSeg makes it easy to train neural networks to segment orthophotos.
ford
Automatically generates FORtran Documentation from comments within the code.
bpa-meta-analysis
Paper - Effect of the plastic pollutant bisphenol A on the biology of aquatic organisms: A meta-analysis
tool_vforwater_loader
Tool specification compliant tool to load data from the V-FOR-WaTer database
awesome-virtual-try-on
A curated list of awesome research papers, projects, code, dataset, workshops etc. related to virtual try-on.
hanlp
中文分词 词性标注 命名实体识别 依存句法分析 成分句法分析 语义依存分析 语义角色标注 指代消解 风格转换 语义相似度 新词发现 关键词短语提取 自动摘要 文本分类聚类 拼音简繁转换 自然语言处理
fsbrain
R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.
pycharge
Differentiable electromagnetics simulation library for moving point charges built on JAX
chmpy
Spherical harmonic shape descriptors, promolecule densities, isosurfaces and Hirshfeld surfaces in python
fairlearn
A Python package to assess and improve fairness of machine learning models.
natcap.invest
InVEST®: models that map and value the goods and services from nature that sustain and fulfill human life.
https://github.com/craylabs/smartredis
SmartSim Infrastructure Library Clients.
rwkv-lm
RWKV (pronounced RwaKuv) is an RNN with great LLM performance, which can also be directly trained like a GPT transformer (parallelizable). We are at RWKV-7 "Goose". So it's combining the best of RNN and transformer - great performance, linear time, constant space (no kv-cache), fast training, infinite ctx_len, and free sentence embedding.
RefManageR
RefManageR: Import and Manage BibTeX and BibLaTeX References in R - Published in JOSS (2017)
mlconjug3
A Python library to conjugate verbs in French, English, Spanish, Italian, Portuguese and Romanian (more soon) using Machine Learning techniques.
asreview-makita
Workflow generator for simulation studies using the command line interface of ASReview LAB
prototype-zne
Zero Noise Extrapolation (ZNE) prototype for error mitigation on the Qiskit Estimator primitive
pydesrap_stroke
Reproducible analytical pipeline (RAP) for Python discrete-event simulation (DES) implementing the Stroke Capacity Planning Model from Monks et al. 2016.
sai
Using explainable to identify regional climate signals to stratospheric aerosol injection
func-adl.ast
Construct hierarchical data queries using SQL-like concepts in python
geospacelab
A python-based library to collect, manage, and visualize geospace data (e.g. OMNI, geomagnetic indices, EISCAT, DMSP, SWARM, TEC, AMPERE, etc.).
pubarchiver
Package up microPublication.org and other journals for archiving into Portico and PMC
tensorflow-recommenders
TensorFlow Recommenders is a library for building recommender system models using TensorFlow.
