optimap
An open-source python library for the processing of fluorescence video data
pydaddy
Python package to discover stochastic differential equations from time series data
stars-reproduce-anagnostou-2022
Assessing the computational reproducibility of Anagnostou et al. 2022 as part of STARS.
syntalos
Synchronized data acquisition from diverse sources and flexible control for behavior experiments
hybrid-pre-doc2vec-doc-relevance
Hybrid approach combining dictionary-based NER and doc2vec
legalkit-pipeline
Publication pipeline for French legal codes on 🤗 Datasets from LegiFrance with concurrent upload and dynamic REAMDE.md.
cooper-optim
A general-purpose, deep learning-first library for constrained optimization in PyTorch
dei-blade-template
A project template to run experiments on the DEI's Blade cluster
bboptpy
Powerful and scalable black-box optimization algorithms for Python and C++.
cbdgen
An Evolutionary Scalable Framework for Synthetic Data Generation based in Data Complexity.
qupid
Qupid (Quantitative PCR Interface to Delta-Delta-Ct) - a versatile web-application for swift Delta-Delta-Ct analysis of qPCR data
behavython
To be used in conjunction with Bonsai-RX to extract behavior from video
bayesianml
This is a GitHub repository for our Bayeisan Machine Learning textbook, which includes the PDF for the book and accompanying Python notebooks.
yaml2script
This is a mirror of https://gitlab.com/yaml2script/yaml2script . yaml2script is a Python script that extracts shell scripts from a GitLab CI/CD configuration file .gitlab-ci.yml and allows you to test/analyze them with tools like shellcheck.
water-benchmark-hub
A platform for accessing and sharing Water Distribution Network benchmarks and data sets
futurecoord
Model-based AI approach for network and service coordination leveraging uncertain traffic forecasts
fiboservice
FiboService is a service for calculating fibonacci numbers using matrix multiplication. I'm working on this simple project to improve as a programmer.
https://github.com/caltechlibrary/py-cli-template
GitHub template project for non-web Python application projects. To use this, DO NOT CLONE OR FORK this repository; click on "Use this template". After it's used to create a new repo, this will run a GitHub Actions workflow to update files and directories, so give it a minute and refresh your browser to see the finished result.
https://github.com/justwhit3/higgs-decay-classification
Classification of Higgs boson decays using machine learning. Project for the "Tandem Project" activity at Master degree in Physics.
automatedfreesurfer
influence-model
A Python implementation of the influence model, a generative model that describes the interactions between networked Markov chains
particlerigiditycalculationtools
A set of Python functions for processing and converting data in units of particle kinetic energy to units of particle rigidity (typically expressed in GV; gigavolts) and vice versa. This is frequently done in the field of solar system radiation physics.
sim-tools
Tools to support the Discrete-Event Simulation process for education and practice.
annodash
[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.
wmd-word2vec
An approach exploring and assessing literature-based doc-2-doc recommendations using word2vec and word mover's distance and applying it to RELISH dataset.
tsdae
Tranformer-based Denoising AutoEncoder for Sentence Transformers Unsupervised pre-training.
atacseq_pipeline
Ultimate ATAC-seq Data Processing, Quantification and Annotation Snakemake Workflow and MrBiomics Module.
annotest
A tool to automatically generating bug-finding inputs for neural network program testing.
skltest
Python library to compare the performance obtained by models available in Scikit-learn to solve regression and classification problems. It is possible to evaluate the influence of successive resampling and optimize the hyperparameters through a K-fold cross-validation holdout.
yh-finance
A Python package that wraps YH Finance API endpoints and returns financial data in JSON.
2sds
[IJCAI 2022] Scene Separation & Data Selection: Temporal Segmentation Algorithm for Real-Time Video Stream Analysis. Pre-print available in the link below.
epylabel
This repository contains the code for the manuscript Ensemble-labeling of infectious diseases time series to evaluate early warning systems with which you can reproduce the manuscript's results and figures.
clean-code
Training materials and slides for courses on version control, clean code and documentation with practical examples and exercises in Python and R
swansf-datapreprocessing-sampling-notebooks
These notebooks provide a comprehensive workflow, from start to finish, for processing and analyzing the SWAN-SF dataset. They include detailed steps for reading the dataset files, performing full preprocessing, and executing classification.
semantic-segmentation-of-landcover.ai-dataset
An implementation of Deeplabv3plus in TensorFlow2 for semantic land cover segmentation
sonnet-automation-code
Tools designed to extract Resonant Frequency & Coupling Quality Factor for Microwave Kinetic Inductance Detector Simulations using a Sonnet .csv data file.
sci-cpy
Scientific Computation Methods in C and Python (Open for Hacktoberfest)
deep_learning_topology_opt
Code for paper "Self-Directed Online Machine Learning for Topology Optimization"
runnable-python
A collection of beginner Python excercises runnable in your browser
insect-detect
Detection models and Python scripts for automated insect monitoring with the Insect Detect DIY camera trap.
comparative-embedding-visualization
A Jupyter widget for comparing two embeddings with shared labels by their confusion, neighborhoods, and size.
basicrta
Bayesian nonparametric inference of ligand binding kinetics from molecular dynamics simulations.
complexity-in-complexity
Code for "Complexity in Complexity: Understanding Visual Complexity Through Structure, Color, and Surprise". CogSci, 2025 & ICLR Re-Align Workshop, 2025.
https://github.com/kmnhan/erlabpy
Complete python workflow for Angle-Resolved Photoemission Spectroscopy (ARPES)
unsub_extender
Unsub Extender takes an Unsub .csv data export file and automates the creation of useful plots and interactive visualizations.
mlpro-test-center
MLPro Test Center – Howtos and benchmarking tools for MLPro components and algorithms
2024-03-26_ed-dash_ml-python
Machine Learning in Python, online workshop 26 - 29 Mar
comma
An agent-based microsimulation model to study mental health outcomes during covid-19 lockdowns
stats-biogeo-2021
Extracting and processing data from MIT's Darwin model, and applying statistical learning methods. In support of submitted manuscript.
axiom_ai
A framework for resonance-based decision-making in artificial agents, combining celestial influences, memory feedback, and symbolic emergence.
python4datascience
Teaching materials for the cusy training courses on Python-based data science workflows: https://cusy.io/en/seminars
sumo-rl-mobicharger
OpenAI-gym-like Reinforcement Learning environment for Dispatching of Mobile Chargers with SUMO. Compatible with Gym and popular RL libraries such as stable-baselines3.
machine-learning-responsible-python
Introduction to responsible machine learning with Python
moonfish
Didactic Python Chess Engine that implements: Negamax, PeSTO’s Evaluation, Null Move, Quiescence Search, Lazy SMP.
grid-reducer
A repository for performing network reduction in distribution system power flow model.
ngl_tools
A collection of tools developed by the Next Generation Liquefaction modelers.
trustpy-tools
TrustPy is a production-ready Python package purpose-built for MLOps pipelines—enabling automated, interpretable analysis of model trustworthiness and predictive reliability before deployment. Available via Conda-Forge and PyPI, with full CI/CD integration and seamless compatibility across modern ML stacks.
