ReproZip
ReproZip: The Reproducibility Packer - Published in JOSS (2016)
igneous-pipeline
Scalable Neuroglancer compatible Downsampling, Meshing, Skeletonizing, Contrast Normalization, Transfers and more.
cheminformatics-microservice
This set of essential and valuable microservices is designed to be accessed via API calls to support cheminformatics.
onnx2tf
Self-Created Tools to convert ONNX files (NCHW) to TensorFlow/TFLite/Keras format (NHWC). The purpose of this tool is to solve the massive Transpose extrapolation problem in onnx-tensorflow (onnx-tf). I don't need a Star, but give me a pull request.
dockstore
An app store for scientific workflows, tools, notebooks, and services
transposonmapper
This repository contains the code for the transposonmapper package to map the transposons from the SATAY sequencing data.
Container Tree
Container Tree: Software to Model Container Filesystems, Packages, and Inheritance - Published in JOSS (2019)
Containershare
Containershare: Open Source Registry to build, test, deploy with CircleCI - Published in JOSS (2018)
inference
Turn any computer or edge device into a command center for your computer vision projects.
cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
libtensorflow_cc
Pre-built libtensorflow_cc.so and Docker Images for TensorFlow C++ API
compss
COMP Superscalar (COMPSs) is a framework which aims to ease the development and execution of applications for distributed infrastructures, such as Clusters, Grids and Clouds.
cresset
Template repository to build PyTorch projects from source on any version of PyTorch/CUDA/cuDNN.
grand-challenge.org
A platform for end-to-end development of machine learning solutions in biomedical imaging
netascore
NetAScore - Network Assessment Score Toolbox for Sustainable Mobility
ika-rwth-aachen/docker-ros
docker-ros automatically builds development and deployment Docker images for your ROS-based repositories
mbari-pbp
Process ocean audio data archives to daily analysis products of hybrid millidecade spectra using PyPAM.
pymaro
Multi-Agent Resource Optimization (MARO) platform is an instance of Reinforcement Learning as a Service (RaaS) for real-world resource optimization problems.
com.arcadedb:arcadedb-console
ArcadeDB Multi-Model Database, one DBMS that supports SQL, Cypher, Gremlin, HTTP/JSON, MongoDB and Redis. ArcadeDB is a conceptual fork of OrientDB, the first Multi-Model DBMS. ArcadeDB supports Vector Embeddings.
mpcontribs
Platform for materials scientists to contribute and disseminate their materials data through Materials Project
tongji-undergrad-thesis
:page_facing_up: 同济大学本科生毕业设计论文模板 | Tongji University Undergraduate Thesis Template | Overleaf / Mac / Linux / Windows / Workshop / Docker
epiphyte
Python toolkit for working with high-dimensional neural data recorded during naturalistic, continuous stimuli @a-darcher @rachrapp
zensols-mimicsid
MIMIC-III corpus parsing and section prediction with MedSecId (COLING paper)
tf2deepfloorplan
TF2 Deep FloorPlan Recognition using a Multi-task Network with Room-boundary-Guided Attention. Enable tensorboard, quantization, flask, tflite, docker, github actions and google colab.
jetson-containers
Machine Learning Containers for NVIDIA Jetson and JetPack-L4T
mexca
Multimodal Emotion eXpression Capture Amsterdam. Pipeline for capturing emotion expressions from multiple modalities (video, audio, text) in the wild.
mementoembed
A service that provides archive-aware oEmbed-compatible embeddable surrogates (social cards, thumbnails, etc.) for archived web pages (mementos).
vrn-docker
:whale: Docker files for Large Pose 3D Face Reconstruction from a Single Image via Direct Volumetric CNN Regression
poc_cleanarch_spring_multimodule
Clean Architecture with SpringBoot and Maven MultiModule
ghost-ssg
A Docker-based pipeline to publish the content of a local Ghost 4 server as static pages.
docker-alpine-ruby
A Ruby focused Docker image with current tooling for development purposes.
mcp-selenium-grid
[DEV PRE-RELEASE, NOT READY, TESTING IN MCP CLIENTS] A Model Context Protocol (MCP) server that enables AI Agents to request and manage Selenium browser instances through a secure API. Perfect for your automated browser testing needs! 🚀 [In development]
docker-alpine-base
A base Docker image with minimal tooling for development purposes.
online-chess
A web application showcasing the integration of Django and React for building a full-stack web chess app. The project demonstrates the usage of Docker for containerization, Celery for task management, and Redis as a message broker
contextual-anomaly-detector
Contextual anomaly detection tool application in building energy field based on Matrix Profile algorithm
bioinformatics
Tool including several common bioinformatics software applications
HelpMe Command Line Helper Utility
HelpMe Command Line Helper Utility - Published in JOSS (2018)
distributed-systems-energy-efficiency
Distributed social media backend showcasing energy efficiency techniques
docker-builds
:package: :whale: Dockerfiles and documentation on tools for public health bioinformatics
docker-web-meme-pam-explorer
A Node.js server application deployed using Docker, designed to present data from docker-app-MEME-PAM-Analyzer. Users can easily browse meme analysis results.
thereminq-classiq
ThereminQ CLassiQ - QuantOPS : Orchestrate Qrack, Bonsai, Qimcifa and Tipsy in OpenCL, VCL and CUDA with an X WebUI
ontoclue_docker
This repository contains the code for the Docker version of the OntoClue Project.
deeptsf
The DeepTSF time series forecasting repository developed by EPU NTUA within the DeployAI project
snakemake_rnaseq
A Snakemake pipeline to go from fastq mRNA sequencing files to raw and normalised counts (usable for downstream EDA and differential analysis)
dockerunifieduimainterface
A UIMA-based tool for the scaled, uniform, distributed, platform-independent and easily reusable use of Natural Language Processing (NLP) methods using Docker.
task_template_dynamic
Containerized template of an architecture that defers advanced computations from an online cognitive task to a cloud server configured to perform these computations.
todosimple-api
Projeto de API RESTful em Spring Boot para gerenciamento de tarefas, com foco em CRUD e autenticação. Parte de um curso interdisciplinar na PUC Minas. Playlist do curso no YouTube
hamrlnc
High-throughput pipeline for modified mRNA annotation and long non-coding RNA annotation
batman-adv-virt
Tools and configurations to virtualize batman-adv via Docker, Vagrant and Packer for tests, simulations and emulations.