corrct • Rank 7.6 • Science 49%

Physically corrected projectors for X-ray induced emission CT.

MtreeRing • Rank 10.6 • Science 46%

A tool for measuring tree-ring width

matlab-stdlib • Rank 2.5 • Science 54%

HDF5, NetCDF4, fileio, system functions that act as an unofficial "stdlib" for Matlab.

phangorn • Rank 20.2 • Science 36%

Phylogenetic analysis in R

gammapyxray • Rank 2.2 • Science 54%

A Python code for X-ray and Gamma-ray Astronomy based on Gammapy

2022-data-and-software-skills • Rank 2.2 • Science 54%

charlatan • Rank 20.1 • Science 36%

Create fake data in R

g-arch • Rank 2.1 • Science 54%

G-Arch (Galactic Archaeology) app to extract stellar parameters and elemental abunances from Gaia RVS spectra

https://github.com/brainglobe/brainglobe-ccf-translator • Rank 6.9 • Science 49%

A tool for translating between common coordinate frameworks using deformation matrices.

colibri-core • Rank 6.9 • Science 49%

Colibri core is an NLP tool as well as a C++ and Python library for working with basic linguistic constructions such as n-grams and skipgrams (i.e patterns with one or more gaps, either of fixed or dynamic size) in a quick and memory-efficient way. At the core is the tool ``colibri-patternmodeller`` whi ch allows you to build, view, manipulate and query pattern models.

phylo.jl • Rank 9.6 • Science 46%

Simple phylogenetic trees in Julia to work with Diversity.jl - https://github.com/EcoJulia/Diversity.jl

r-rgbif • Rank 9.6 • Science 46%

Interface to the Global Biodiversity Information Facility API

@appthreat/atom • Rank 19.6 • Science 36%

atom is a novel intermediate representation for applications and a standalone tool that is powered by chen.

snudda • Rank 6.4 • Science 49%

Create realistic networks of neurons, synapses placed using touch detection between axons and dendrites

rcompendium • Rank 11.1 • Science 44%

:package: Create a package or compendium structure

ade4 • Rank 19.0 • Science 36%

Analysis of Ecological Data : Exploratory and Euclidean Methods in Environmental Sciences

readODS • Rank 19.0 • Science 36%

Read ODS (OpenDocument Spreadsheet) into R as data frame. Also support writing data frame into ODS file.

rebird • Rank 18.9 • Science 36%

Wrapper to the eBird API

dodgr • Rank 18.8 • Science 36%

Distances on Directed Graphs in R

relter • Rank 5.8 • Science 49%

An Interface for the 'eLTER' Community

my-data-analysis-code • Rank 0.7 • Science 54%

my-awesome-research-software • Rank 0.7 • Science 54%

Awesome software

codeneon • Rank 0.7 • Science 54%

A Visual Studio Code theme

Economiccomplexity — Peer-reviewed • Rank 5.6 • Science 49%

Economiccomplexity: Computational Methods for Economic Complexity - Published in JOSS (2020)

prism • Rank 18.6 • Science 36%

Download data from the Oregon PRISM climate data project http://www.prism.oregonstate.edu/

iotables • Rank 5.5 • Science 49%

Importing and Manipulating Symmetric Input-Output Tables

RAQSAPI • Rank 10.5 • Science 44%

A R extension to Retrieve EPA Air Quality System Data via the AQS Data Mart API

barulho • Rank 10.4 • Science 44%

An R package to quantify habitat-induced degradation of (animal) acoustic signals

occcite • Rank 5.4 • Science 49%

Querying database aggregators and citing primary sources of resulting occurrence records.

fwildclusterboot • Rank 15.4 • Science 39%

Fast Wild Cluster Bootstrap Inference for Regression Models / OLS in R. Additionally, R port to WildBootTests.jl via the JuliaConnectoR.

rredlist • Rank 18.3 • Science 36%

IUCN Red List API Client

helsinki • Rank 10.3 • Science 44%

R Tools for open data on Helsinki capital region in Finland

guaguas • Rank 10.2 • Science 44%

Un paquete de R con datos sobre nombres de bebés registrados en Chile entre 1920 y 2021

rdflib • Rank 18.1 • Science 36%

:package: High level wrapper around the redland package for common rdf applications

fftw • Rank 18.1 • Science 36%

DO NOT CHECK OUT THESE FILES FROM GITHUB UNLESS YOU KNOW WHAT YOU ARE DOING. (See below.)

comtradr • Rank 17.9 • Science 36%

Functions for Interacting with the UN Comtrade API

outsider — Peer-reviewed • Rank 4.9 • Science 49%

outsider: Install and run programs, outside of R, inside of R - Published in JOSS (2020)

pynn • Rank 17.8 • Science 36%

A Python package for simulator-independent specification of neuronal network models.

SODAR Core — Peer-reviewed • Rank 4.8 • Science 49%

SODAR Core: a Django-based framework for scientific data management and analysis web apps - Published in JOSS (2020)

rerddap • Rank 17.8 • Science 36%

R client for working with ERDDAP servers

qcengine • Rank 17.5 • Science 36%

Quantum chemistry program executor and IO standardizer (QCSchema).

hoardr • Rank 17.4 • Science 36%

Manage cached files

riem • Rank 17.3 • Science 36%

:airplane: :sunny: R package for accessing ASOS data via the Iowa Environment Mesonet :cloud: :airplane:

citesdb — Peer-reviewed • Rank 4.2 • Science 49%

citesdb: An R package to support analysis of CITES Trade Database shipment-level data - Published in JOSS (2019)

matreex • Rank 4.0 • Science 49%

LESSEM internal package for simulation of forest dynamic depending on climatic variables

Hytool — Peer-reviewed • Rank 3.8 • Science 49%

Hytool: an open source matlab toolbox for the interpretation of hydraulic tests using analytical solutions - Published in JOSS (2017)

gitmc • Rank 3.8 • Science 49%

concurrent, pure Python asyncio + Git: manage large (100+) numbers of Git repos

node-red-contrib-oscar-cowsay • Rank 8.7 • Science 44%

Low-code composition of AI inference pipelines

dfms • Rank 3.7 • Science 49%

Dynamic Factor Models for R

gds17 • Rank 3.6 • Science 49%

Geographic Data Science'17

km3io • Rank 3.5 • Science 49%

wdman • Rank 16.2 • Science 36%

Webdriver/Selenium Binary Manager

nexus2json_mapper • Rank 0.0 • Science 52%

Rclean — Peer-reviewed • Rank 5.9 • Science 46%

Rclean: A Tool for Writing Cleaner, More Transparent Code - Published in JOSS (2020)

eeguana • Rank 5.9 • Science 46%

A package for manipulating EEG data in R.

ecosistem.jl • Rank 5.9 • Science 46%

Julia package for ecosystem simulation

gophernotes • Rank 15.9 • Science 36%

The Go kernel for Jupyter notebooks and nteract.

LAS — Peer-reviewed • Rank 2.7 • Science 49%

LAS: an integrated language analysis tool for multiple languages - Published in JOSS (2016)

gdistance • Rank 12.7 • Science 39%

Calculate distances and routes on geographic grids.

rvertnet • Rank 15.6 • Science 36%

Wrapper to the VertNet API

Ternary • Rank 15.5 • Science 36%

Create ternary plots in R

bittrex — Peer-reviewed • Rank 5.5 • Science 46%

bittrex: An R client for the Bittrex Crypto-Currency Exchange - Published in JOSS (2017)

ClimMobTools • Rank 12.5 • Science 39%

API Client for the 'ClimMob' platform in R

chickpeaascodispersal • Rank 2.5 • Science 49%

Chickpea _Ascochyta rabiei_ Spore Dispersal Modelling

cluefish • Rank 2.3 • Science 49%

A specialised workflow designed to enhance the biological interpretation of transcriptomic data series 🎣

tarchetypes • Rank 15.2 • Science 36%

Archetypes for targets and pipelines

brightway2 • Rank 15.1 • Science 36%

Metapackage for brightway2 imports and documentation

turtle • Rank 2.1 • Science 49%

A Turtle converter for R

cbioportalR • Rank 15.0 • Science 36%

R package to wrap cBioPortal's API to pull data from public or private cBioPortal databases

nestml • Rank 15.0 • Science 36%

A domain specific language for neuron and synapse models in spiking neural network simulation

folddock • Rank 1.9 • Science 49%

distanceto • Rank 6.9 • Science 44%

:package: distanceto is an R package to calculate distances from point locations to features

php-swh-client • Rank 1.4 • Science 49%

Software Heritage API Client - https://doi.org/10.5281/zenodo.12808864

beta-faircore4eosc • Rank 1.4 • Science 49%

Beta Release Demo - https://doi.org/10.5281/zenodo.12808833

rsat • Rank 11.3 • Science 39%

Dealing with Multiplatform Satellite Images from Landsat, MODIS, and Sentinel

nlstools • Rank 14.3 • Science 36%

Tools for Nonlinear Regression Analysis

libhwloc • Rank 14.2 • Science 36%

Hardware locality (hwloc)

maldiquant • Rank 6.2 • Science 44%

Quantitative Analysis of Mass Spectrometry Data

melt • Rank 11.1 • Science 39%

Multiple empirical likelihood tests

The psyplot interactive visualization framework — Peer-reviewed • Rank 1.1 • Science 49%

The psyplot interactive visualization framework - Published in JOSS (2017)

dmt-core • Rank 4.1 • Science 46%

DeviceModelingToolkit (DMT) is a Python tool targeted at helping modeling engineers extract model parameters, run circuit and TCAD simulations and automate their infrastructure.

datos • Rank 13.7 • Science 36%

Traducción al español de los datasets utilizados en el libro "R para Ciencia de Datos"

scripttool • Rank 5.5 • Science 44%

Tool for working with various screenplay file formats (E.g. fdx, fadein, osf, and fountain)

fountain • Rank 5.4 • Science 44%

experimental golang package for working with Fountain formatted screenplays.

fdx • Rank 5.3 • Science 44%

An experimental go package for working with Final Draft fdx files.

gosset • Rank 13.2 • Science 36%

Tools for Data Analysis in Experimental Agriculture

kruskal-almostfull • Rank 0.0 • Science 49%

Library of basic results about Almost Full relations in Coq

karp-miller • Rank 0.0 • Science 49%

A Coq mechanization of the Karp-Miller algorithm based on Kruskal-AlmostFull

odetoolbox • Rank 12.9 • Science 36%

Automatic selection and generation of integration schemes for systems of ordinary differential equations

taxadb • Rank 12.8 • Science 36%

:package: Taxonomic Database

codemetapy • Rank 9.8 • Science 39%

A Python package for generating and working with codemeta

codemapper • Rank 2.7 • Science 46%

R package for working with clinical codes

clam • Rank 12.7 • Science 36%

Quickly turn command-line applications into RESTful webservices with a web-application front-end. You provide a specification of your command line application, its input, output and parameters, and CLAM wraps around your application to form a fully fledged RESTful webservice.

burgerlinker • Rank 4.6 • Science 44%

Command line tool for linking civil registries

trias • Rank 4.6 • Science 44%

R package with functionality for TrIAS and LIFE RIPARIAS

destine_esa_gfts • Rank 4.4 • Science 44%

Global Fish Tracking Service - DestinE DESP Use Case

bebi103 • Rank 12.3 • Science 36%

Utilities for BE/Bi 103

RGCCA • Rank 12.2 • Science 36%

relic • Rank 4.1 • Science 44%

Tools for working with version-controlled data science workflows

wmm • Rank 8.9 • Science 39%

R implementation of World Magnetic Model