yaib
🧪Yet Another ICU Benchmark: a holistic framework for the standardization of clinical prediction model experiments. Provide custom datasets, cohorts, prediction tasks, endpoints, preprocessing, and models. Paper: https://arxiv.org/abs/2306.05109
pheno-ranker-ui
The web ui (R-Shiny application) for Pheno-Ranker, a tool designed for performing semantic similarity analysis on phenotypic data structured in JSON format, such as Beacon v2 Models or Phenopackets v2
https://github.com/aphp/cohort360-frontend
A web application to find patients, build cohorts and visualize health records
annodash
[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.
ICD_GEMs
ICD_GEMs.jl is a Julia package that allows to translate ICD-9 codes in ICD-10 and viceversa via the General Equivalence Mappings (GEMs) of the International Classification of Diseases (ICD).
https://github.com/berkanlafci/oadat
OADAT: Experimental and Synthetic Clinical Optoacoustic Data for Standardized Image Processing
https://github.com/csinva/clinical-rule-survey
Analyzing clinical decision instruments through the lens of data and large language models.
clintrialx
R package to fetch and explore clinical trials data from freely available registries. Fetch data in bulk, customize data and build comprehensive html reports. Currently, it supports the ClinicalTrials.gov registry and CTTI AACT (Access to Aggregate Content of ClinicalTrials.gov).