Data

Tools

Indexes

Applications

Experiments

Open Source Science

Updated 5 months ago

https://github.com/althonos/pyfamsa • Rank 12.2 • Science 49%

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.

Updated 6 months ago

pymsaviz • Rank 13.9 • Science 44%

MSA(Multiple Sequence Alignment) visualization python package for sequence analysis

Updated 5 months ago

https://github.com/althonos/pytrimal • Rank 11.3 • Science 36%

Cython bindings and Python interface to trimAl, a tool for automated alignment trimming. Now with SIMD!

Updated 5 months ago

https://github.com/althonos/pymuscle5 • Rank 3.2 • Science 23%

Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.

Updated 5 months ago

https://github.com/benhid/sequoya • Rank 6.2 • Science 13%

Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics

Updated 6 months ago

neffy • Science 67%

NEFF Calculator and MSA File Converter