Scientific Software
Updated 6 months ago

AIBECS.jl — Peer-reviewed • Rank 6.1 • Science 100%

AIBECS.jl: A tool for exploring global marine biogeochemical cycles. - Published in JOSS (2022)

Updated 6 months ago

sbgnviz • Rank 12.2 • Science 85%

A web based visualization tool for process description maps in SBGN

Updated 6 months ago

chise • Rank 10.0 • Science 85%

A web application to visualize and edit the pathway models represented by SBGN Process Description Notation

Updated 6 months ago

pathway-mapper • Rank 13.6 • Science 75%

PathwayMapper: An interactive and collaborative graphical curation tool for cancer pathways

Updated 6 months ago

graphite • Rank 17.7 • Science 54%

GRAPH Interaction from pathway Topological Environment

Updated 6 months ago

BioCor • Rank 15.4 • Science 54%

Package to calculate functional similarity between genes https://biocor.llrs.dev

Updated 6 months ago

msigdbr • Rank 16.4 • Science 36%

MSigDB gene sets for multiple organisms in a tidy data format

Updated 6 months ago

fedup • Rank 11.5 • Science 10%

Bioconductor package for pathway enrichment and depletion analysis via a Fisher's exact test on custom test sets and annotations

Updated 6 months ago

famat • Rank 10.7 • Science 10%

Functional analysis of metabolic and transcriptomic data

Updated 4 months ago

https://github.com/ivis-at-bilkent/sybvals • Science 34%

SyBValS: Systems Biology Validation Service