Scientific Software
Updated 9 months ago

Genotify — Peer-reviewed • Rank 4.9 • Science 93%

Genotify: Fast, lightweight gene lookup and summarization - Published in JOSS (2018)

Updated 9 months ago

snpsea • Rank 3.7 • Science 67%

:bar_chart: Identify cell types and pathways affected by genetic risk loci.

Updated 9 months ago

BioCor • Rank 15.4 • Science 54%

Package to calculate functional similarity between genes https://biocor.llrs.dev

Updated 9 months ago

recount • Rank 17.4 • Science 23%

R package for the recount2 project. Documentation website: http://leekgroup.github.io/recount/

Updated 9 months ago

cmappy • Rank 15.6 • Science 10%

Assorted tools for interacting with .gct, .gctx files and other Connectivity Map (Broad Institute) data/tools

Updated 9 months ago

genepal • Science 57%

A Nextflow pipeline for genome and pan-genome annotation

Updated 9 months ago

GeneFinder • Science 77%

A Gene Finder framework for Julia.

Updated 9 months ago

https://github.com/bridgedb/create-bridgedb-genedb • Science 18%

Example of script to query BioMart, parse and create a BridgeDb database