Scientific Software
Updated 11 months ago

seaborn — Peer-reviewed • Rank 34.7 • Science 100%

seaborn: statistical data visualization - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

lifelines — Peer-reviewed • Rank 27.3 • Science 100%

lifelines: survival analysis in Python - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

MLxtend — Peer-reviewed • Rank 26.9 • Science 95%

MLxtend: Providing machine learning and data science utilities and extensions to Python's scientific computing stack - Published in JOSS (2018)

Scientific Software
Updated 11 months ago

Flux — Peer-reviewed • Rank 21.9 • Science 100%

Flux: Elegant machine learning with Julia - Published in JOSS (2018)

Scientific Software
Updated 11 months ago

imodels — Peer-reviewed • Rank 21.0 • Science 100%

imodels: a python package for fitting interpretable models - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

anndata — Peer-reviewed • Rank 24.6 • Science 95%

anndata: Access and store annotated data matrices - Published in JOSS (2024)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Retriever — Peer-reviewed • Rank 18.2 • Science 100%

Retriever: Data Retrieval Tool - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

The drake R package — Peer-reviewed • Rank 22.7 • Science 95%

The drake R package: a pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2018)

Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

The targets R package — Peer-reviewed • Rank 22.4 • Science 95%

The targets R package: a dynamic Make-like function-oriented pipeline toolkit for reproducibility and high-performance computing - Published in JOSS (2021)

Engineering Sociology Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Learning from Crowds with Crowd-Kit — Peer-reviewed • Rank 17.3 • Science 100%

Learning from Crowds with Crowd-Kit - Published in JOSS (2024)

Artificial Intelligence and Machine Learning
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Feature-engine — Peer-reviewed • Rank 24.3 • Science 93%

Feature-engine: A Python package for feature engineering for machine learning - Published in JOSS (2021)

Mathematics Economics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

mlr3 — Peer-reviewed • Rank 21.2 • Science 95%

mlr3: A modern object-oriented machine learning framework in R - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Machine Learning Validation via Rational Dataset Sampling with astartes — Peer-reviewed • Rank 15.6 • Science 100%

Machine Learning Validation via Rational Dataset Sampling with astartes - Published in JOSS (2023)

Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Visions — Peer-reviewed • Rank 22.2 • Science 93%

Visions: An Open-Source Library for Semantic Data - Published in JOSS (2020)

Sociology
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Ripser.py — Peer-reviewed • Rank 18.9 • Science 95%

Ripser.py: A Lean Persistent Homology Library for Python - Published in JOSS (2018)

Artificial Intelligence and Machine Learning (36%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

PyClustering — Peer-reviewed • Rank 20.2 • Science 93%

PyClustering: Data Mining Library - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

DeepRiver — Peer-reviewed • Rank 12.6 • Science 100%

DeepRiver: A Deep Learning Library for Data Streams - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

traffic, a toolbox for processing and analysing air traffic data — Peer-reviewed • Rank 17.4 • Science 95%

traffic, a toolbox for processing and analysing air traffic data - Published in JOSS (2019)

Earth and Environmental Sciences Artificial Intelligence and Machine Learning Political Science
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Pyglmnet — Peer-reviewed • Rank 16.9 • Science 95%

Pyglmnet: Python implementation of elastic-net regularized generalized linear models - Published in JOSS (2020)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Sciris — Peer-reviewed • Rank 16.4 • Science 95%

Sciris: Simplifying scientific software in Python - Published in JOSS (2023)

Scientific Software
Updated 11 months ago

Rdataretriever — Peer-reviewed • Rank 18.3 • Science 93%

Rdataretriever: R Interface to the Data Retriever - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Updated 11 months ago

craterpy • Rank 11.2 • Science 100%

A python library for impact crater data science

Scientific Software
Updated 11 months ago

tpcp — Peer-reviewed • Rank 12.9 • Science 98%

tpcp: Tiny Pipelines for Complex Problems - A set of framework independent helpers for algorithms development and evaluation - Published in JOSS (2023)

Mathematics (37%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

VeridicalFlow — Peer-reviewed • Rank 10.4 • Science 100%

VeridicalFlow: a Python package for building trustworthy data science pipelines with PCS - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

Astronomical échelle spectroscopy data analysis with `muler` — Peer-reviewed • Rank 12.1 • Science 98%

Astronomical échelle spectroscopy data analysis with `muler` - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

NiaARM — Peer-reviewed • Rank 11.4 • Science 98%

NiaARM: A minimalistic framework for Numerical Association Rule Mining - Published in JOSS (2022)

Scientific Software
Updated 11 months ago

Foundry-ML - Software and Services to Simplify Access to Machine Learning Datasets in Materials Science — Peer-reviewed • Rank 14.0 • Science 95%

Foundry-ML - Software and Services to Simplify Access to Machine Learning Datasets in Materials Science - Published in JOSS (2024)

Artificial Intelligence and Machine Learning (30%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

SysIdentPy — Peer-reviewed • Rank 15.8 • Science 93%

SysIdentPy: A Python package for System Identification using NARMAX models - Published in JOSS (2020)

Scientific Software
Updated 11 months ago

Multiblock PLS — Peer-reviewed • Rank 10.3 • Science 98%

Multiblock PLS: Block dependent prediction modeling for Python - Published in JOSS (2019)

Scientific Software
Updated 11 months ago

yadg — Peer-reviewed • Rank 13.3 • Science 95%

yadg: yet another datagram - Published in JOSS (2022)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

pyrolite — Peer-reviewed • Rank 7.8 • Science 100%

pyrolite: Python for geochemistry - Published in JOSS (2020)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

bcdata — Peer-reviewed • Rank 14.3 • Science 93%

bcdata: An R package for searching & retrieving data from the B.C. Data Catalogue - Published in JOSS (2021)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

ChainoPy — Peer-reviewed • Rank 8.9 • Science 98%

ChainoPy: A Python Library for Discrete Time Markov Chain Based Stochastic Analysis - Published in JOSS (2024)

Scientific Software
Updated 11 months ago

Nominally — Peer-reviewed • Rank 6.2 • Science 100%

Nominally: A Name Parser for Record Linkage - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

BetaML — Peer-reviewed • Rank 10.5 • Science 95%

BetaML: The Beta Machine Learning Toolkit, a self-contained repository of Machine Learning algorithms in Julia - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

HRV — Peer-reviewed • Rank 12.5 • Science 93%

HRV: a Pythonic package for Heart Rate Variability Analysis - Published in JOSS (2020)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

UKCensusAPI — Peer-reviewed • Rank 10.4 • Science 95%

UKCensusAPI: python and R interfaces to the nomisweb UK census data API - Published in JOSS (2017)

Earth and Environmental Sciences (40%) Engineering (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

TDAstats — Peer-reviewed • Rank 11.3 • Science 93%

TDAstats: R pipeline for computing persistent homology in topological data analysis - Published in JOSS (2018)

Scientific Software
Updated 11 months ago

IKPLS — Peer-reviewed • Rank 9.1 • Science 95%

IKPLS: Improved Kernel Partial Least Squares and Fast Cross-Validation Algorithms for Python with CPU and GPU Implementations Using NumPy and JAX - Published in JOSS (2024)

Scientific Software
Updated 11 months ago

nimCSO — Peer-reviewed • Rank 5.0 • Science 98%

nimCSO: A Nim package for Compositional Space Optimization - Published in JOSS (2024)

Artificial Intelligence and Machine Learning (40%)
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

MarSwitching.jl — Peer-reviewed • Rank 3.7 • Science 98%

MarSwitching.jl: A Julia package for Markov switching dynamic models - Published in JOSS (2024)

Earth and Environmental Sciences
Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

scikit-hubness — Peer-reviewed • Rank 8.4 • Science 93%

scikit-hubness: Hubness Reduction and Approximate Neighbor Search - Published in JOSS (2020)

Scientific Software
Updated 11 months ago

visxhclust — Peer-reviewed • Rank 8.0 • Science 93%

visxhclust: An R Shiny package for visual exploration of hierarchical clustering - Published in JOSS (2022)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

Syd — Peer-reviewed • Rank 7.7 • Science 93%

Syd: A package for making interactive data visualizations in python - Published in JOSS (2025)

Scientific Software
Updated 11 months ago

MLMOD — Peer-reviewed • Rank 1.8 • Science 98%

MLMOD: Machine Learning Methods for Data-Driven Modeling in LAMMPS - Published in JOSS (2023)

Scientific Software · Peer-reviewed
Scientific Software
Updated 11 months ago

latentcor — Peer-reviewed • Rank 4.4 • Science 95%

latentcor: An R Package for estimating latent correlations from mixed data types - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

ConTEXT Explorer — Peer-reviewed • Rank 4.4 • Science 95%

ConTEXT Explorer: a web-based text analysis tool for exploring and visualizing concepts across time - Published in JOSS (2021)

Scientific Software
Updated 11 months ago

plotastic — Peer-reviewed • Rank 5.3 • Science 93%

plotastic: Bridging Plotting and Statistics in Python - Published in JOSS (2024)

Scientific Software
Updated 11 months ago

Multivariate Covariance Generalized Linear Models in Python — Peer-reviewed • Rank 1.4 • Science 93%

Multivariate Covariance Generalized Linear Models in Python: The mcglm library - Published in JOSS (2024)

Mathematics Economics
Scientific Software · Peer-reviewed
Updated 11 months ago

hermes-rheo • Science 49%

Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data

Scientific Software
Updated 11 months ago

DiRe - JAX — Peer-reviewed • Science 93%

DiRe - JAX: A JAX based Dimensionality Reduction Algorithm for Large-scale Data - Published in JOSS (2025)