g-tomo-3d • Rank 1.4 • Science 67%

G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. 3d visualiser (slice & annotate)

iml — Peer-reviewed • Rank 19.2 • Science 49%

iml: An R package for Interpretable Machine Learning - Published in JOSS (2018)

CatastRo • Rank 11.2 • Science 57%

R package to query Sede Electrónica del Catastro (Spain)

datatools • Rank 5.7 • Science 62%

A set of tools for working with JSON, CSV and Excel workbooks

fitdistrplus • Rank 18.7 • Science 49%

Help to Fit of a Parametric Distribution to Non-Censored or Censored Data

s-disco • Rank 0.7 • Science 67%

S-Disco - stellar discovery app

linemap • Rank 5.4 • Science 62%

Create maps made of (ridge) lines

BaseSet • Rank 10.4 • Science 57%

Provides classes for working with sets

pydatapipeline • Rank 8.3 • Science 59%

Python Implementation of the FAIR Data Pipeline API

ohun • Rank 10.2 • Science 57%

Automatic detection of acoustic signals

mctq • Rank 10.0 • Science 57%

☀️ An R Package for the Munich ChronoType Questionnaire

rasterpic • Rank 10.0 • Science 57%

Convert digital images into georeferenced rasters

dataset • Rank 5.0 • Science 62%

dataset is a command line tool, Go package, shared library and Python package for working with JSON objects as collections

lingtypology • Rank 18.0 • Science 49%

R package for linguistic cartography and typological databases search

mapiso • Rank 4.7 • Science 62%

Transformation of regularly spaced grids into contour polygons

caltechlibrary/waystation • Rank 4.6 • Science 62%

Automatically archive your repository's GitHub Pages in the Wayback Machine.

igor • Rank 9.5 • Science 57%

R package to extract information from the Intergovernmental Organizations ('IGO') Database , version 3, provided by the Correlates of War Project https://correlatesofwar.org/

arcgeocoder • Rank 9.3 • Science 57%

Lite interface for geocoding with ArcGIS REST API

arkdb • Rank 17.2 • Science 49%

Archive and unarchive databases as flat text files

nlmr • Rank 7.2 • Science 59%

📦 R package to simulate neutral landscape models 🏔

PyGBe-LSPR — Peer-reviewed • Rank 6.8 • Science 59%

PyGBe-LSPR: Python and GPU Boundary-integral solver for electrostatics - Published in JOSS (2017)

resmush • Rank 8.6 • Science 57%

Compress local and online images using the reSmush.it API service https://resmush.it/

dartr • Rank 6.6 • Science 59%

Importing and Analysing DArT type snp and silicodart data

cloud-init-examples • Rank 3.6 • Science 62%

This repository includes an example of cloud-init YAML files for use with multipass VMs.

mlr3spatiotempcv • Rank 6.5 • Science 59%

Spatiotemporal resampling methods for mlr3

rdhs • Rank 6.5 • Science 59%

API Client and Data Munging for the Demographic and Health Survey Data

Gillespie.jl — Peer-reviewed • Rank 6.4 • Science 59%

Gillespie.jl: Stochastic Simulation Algorithm in Julia - Published in JOSS (2016)

spotifyr • Rank 16.4 • Science 49%

R wrapper for Spotify's Web API

caltechlibrary.github.io • Rank 3.2 • Science 62%

Caltech Library's Digital Library Development sandbox.

openalexR • Rank 16.2 • Science 49%

Getting bibliographic records from OpenAlex

template • Rank 3.2 • Science 62%

Template repository for software projects by the Caltech Library

km3pipe • Rank 6.1 • Science 59%

Extemporary analysis framework for KM3NeT

Gravity — Peer-reviewed • Rank 5.9 • Science 59%

Gravity: Estimation Methods for Gravity Models in R - Published in JOSS (2018)

bssm • Rank 15.8 • Science 49%

Bayesian Inference of State Space Models

Welcome to the Tidyverse — Peer-reviewed • Rank 28.8 • Science 36%

Welcome to the Tidyverse - Published in JOSS (2019)

landscapemetrics • Rank 15.6 • Science 49%

Landscape Metrics for Categorical Map Patterns 🗺️ in R

iucnn • Rank 5.6 • Science 59%

Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of "Not Evaluated" species, for any taxon or geographic region of interest. https://iucnn.github.io/IUCNN/

pdrtpy • Rank 10.6 • Science 54%

PhotoDissociation Region Toolbox Python module

treetools • Rank 5.3 • Science 59%

Create, modify and analyse phylogenetic trees in R

gds18 • Rank 5.0 • Science 59%

Geographic Data Science'18

CoordinateCleaner • Rank 15.0 • Science 49%

Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.

rage • Rank 14.6 • Science 49%

R tools for performing ageing focussed analyses using matrix population models.

beautier • Rank 14.6 • Science 49%

R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2

reproducibility_in_plant_pathology • Rank 4.5 • Science 59%

A systematic/quantitative review of articles, which provides a basis for identifying what has been done so far in the field of plant pathology research reproducibility and suggestions for ways to improving it.

coif • Rank 1.4 • Science 62%

Cover image finder

data-collections-explorer • Rank 1.4 • Science 62%

An information system focused on the engineering sciences

gamer • Rank 9.4 • Science 54%

R colour palettes inspired by video games

h5rdmtoolbox • Rank 4.3 • Science 59%

Supporting a FAIR Research Data lifecycle using Python and HDF5.

irg • Rank 6.3 • Science 57%

:package: irg is an R package for calculating the instantaneous rate of green-up.

im • Rank 14.2 • Science 49%

Infrastructure Manager

org.dishevelled:dsh-bio • Rank 6.2 • Science 57%

dishevelled.org bio

fortran-error-handler • Rank 4.1 • Science 59%

Comprehensive error framework for applications requiring functional and robust error handling, utilising the power of modern object-oriented Fortran.

tvb • Rank 17.1 • Science 46%

Main TVB codebase

rcompadre • Rank 14.0 • Science 49%

R tools for obtaining and manupulating data from the COMPADRE and COMADRE Plant and Animal Matrix Databases

zowie • Rank 8.7 • Science 54%

Adds Zotero "select" links to attachment files in a Zotero database on macOS, so that outside of Zotero, you can find the bibliographic entry to which a file belongs. (Only works for local storage, not linked attachments.)

nmr_fair-dos • Rank 0.7 • Science 62%

This tool extracts metadata regarding NMR data from multiple repositories and creates FAIR-DOs for them.

ascotracer • Rank 3.7 • Science 59%

This is a clean clone of ascotraceR

pmc • Rank 13.7 • Science 49%

:package: Phylogenetic Monte Carlo: Quantifying Uncertainty in Phylogenetic Methods (now on CRAN)

aorsf — Peer-reviewed • Rank 13.7 • Science 49%

aorsf: An R package for supervised learning using the oblique random survival forest - Published in JOSS (2022)

django-sodar-core • Rank 13.6 • Science 49%

SODAR Core: A Django-based framework for building scientific data management web apps

auth_capture_proxy • Rank 18.4 • Science 44%

A Python project for capturing auth credentials using a proxy.

plinkqc • Rank 13.4 • Science 49%

R package for quality control of plink genetic datasets

isogeochem • Rank 8.4 • Science 54%

isogeochem makes working with carbonate oxygen, carbon, and clumped isotope data reproducible and straightforward. Use it to quickly calculate isotope fractionation factors, and apply paleothermometry equations.

warbler • Rank 13.3 • Science 49%

streamline acoustic analysis in R

metador-core • Rank 8.1 • Science 54%

Core of Metador, the FAIR metadata-first research data management framework.

ecocomDP • Rank 12.9 • Science 49%

A dataset design pattern and R package for ecological community data.

nlrx • Rank 12.6 • Science 49%

nlrx NetLogo R

funbiogeo • Rank 4.4 • Science 57%

:package: R package to streamline functional biogeography workflows and provide publication-ready plots

spyrit • Rank 12.1 • Science 49%

A Python toolbox for deep image reconstruction, with emphasis on single-pixel imaging.

git2rdata • Rank 6.8 • Science 54%

An R package for storing and retrieving data.frames in git repositories.

adjustedCurves • Rank 11.7 • Science 49%

An R-Package to estimate and plot confounder-adjusted survival curves (single event survival data) and confounder-adjusted cumulative incidence functions (data with competing risks) using various methods.

PlotTools • Rank 11.5 • Science 49%

Tools for plotting with base R

soltrack • Rank 6.5 • Science 54%

The Python version of the SolTrack code to compute the position of and track the Sun.

siibra-explorer • Rank 6.4 • Science 54%

ichthyop • Rank 6.1 • Science 54%

A Lagrangian tool for simulating ichthyoplankton dynamics

pal • Rank 6.0 • Science 54%

Positional Astronomy Library

urial • Rank 5.9 • Science 54%

Urial (URI Addition tooL) intelligently updates URIs stored in Finder comments of macOS files

poems • Rank 10.8 • Science 49%

Pattern-oriented ensemble modelling and simulation (with spatially explicit populations)

vesical • Rank 10.7 • Science 49%

A generalized python library for calculating and plotting various things related to mixed volatile (H2O-CO2) solubility in silicate melts.

meanfieldgraph.jl • Rank 0.7 • Science 59%

Estimation in a mean field graph

megasanjay/upload-to-zenodo • Rank 5.7 • Science 54%

A GitHub action to automatically push a release to Zenodo

nest-desktop • Rank 10.6 • Science 49%

NEST Desktop is a web-based GUI for NEST Simulator and other simulators of spiking networks.

catastronav • Rank 2.5 • Science 57%

R package to query Catastro de Navarra (Spain)

skimr • Rank 22.9 • Science 36%

A frictionless, pipeable approach to dealing with summary statistics

eprinttools • Rank 6.7 • Science 52%

EPrintTools is a Go package, command line utilities and a service for working with EPrints 3.3.x EPrint XML and REST API

devonthink-hacks • Rank 4.7 • Science 54%

Scripts and other things for working with DEVONthink, a personal information management system.

nlppln • Rank 4.5 • Science 54%

NLP pipeline software using common workflow language

nc4fortran • Rank 4.4 • Science 54%

Object-oriented Fortran NetCDF4 interface

typetracer • Rank 9.4 • Science 49%

Trace Function Parameter Types in R

esibayes • Rank 4.3 • Science 54%

Optimization and state estimation of dynamic models

mapineqr • Rank 1.1 • Science 57%

Access Mapineq inequality indicators via API

neuron • Rank 21.7 • Science 36%

NEURON Simulator

cfid • Rank 8.7 • Science 49%

cfid: R package for identifying counterfactuals.

h5fortran-mpi • Rank 3.2 • Science 54%

HDF5-MPI parallel Fortran object-oriented interface

msapy • Rank 7.9 • Science 49%

Hopefully, a compact and general-purpose Python package for Multiperturbation Shapley value Analysis (MSA).

octolog • Rank 2.8 • Science 54%

Better Github Action Logging

cowsay • Rank 20.8 • Science 36%

cowsay w/ more animals, in R

dotpath • Rank 4.8 • Science 52%

A Go, Python and TypeScript modules for working with map, dicts and objects accessing them using a dot path notation.

geotargets • Rank 12.7 • Science 44%

Targets extensions for geospatial data

maptran3d • Rank 2.7 • Science 54%

Modern Fortran 3D coordinate conversions for geospace ecef enu eci