Scientific Software
Updated 10 months ago

Chaste — Peer-reviewed • Rank 9.7 • Science 95%

Chaste: Cancer, Heart and Soft Tissue Environment - Published in JOSS (2020)

Scientific Software
Updated 10 months ago

Flint — Peer-reviewed • Rank 3.7 • Science 95%

Flint: a simulator for biological and physiological models in ordinary and stochastic differential equations - Published in JOSS (2020)

Scientific Software · Peer-reviewed
Updated 10 months ago

phys2bids • Rank 14.1 • Science 59%

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

Updated 10 months ago

phys2cvr • Rank 10.0 • Science 59%

python module to compute cerebrovascular reactivity mapping and other related maps

Updated 9 months ago

peakdet • Rank 11.4 • Science 36%

Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

Updated 10 months ago

phys2denoise • Rank 8.1 • Science 36%

A toolbox and collection of scripts to prepare physiology data for fMRI denoise

Updated 10 months ago

rzss-flapper • Science 67%

Statistical modelling for Cole et al. (in prep). Physiological responses to capture, handling and tagging in flapper skate (Dipturus intermedius).

Updated 9 months ago

https://github.com/cremerlab/flux_parity • Science 10%

Complete history of the manuscript "An Optimal Regulation of Fluxes Dictates Microbial Growth In and Out of Steady-State"