Updated 9 months ago

SNPRelate • Rank 19.5 • Science 39%

R package: parallel computing toolset for relatedness and principal component analysis of SNP data (Development version only)

Updated 9 months ago

SeqArray • Rank 17.7 • Science 39%

Data management of large-scale whole-genome sequence variant calls using GDS files (Development version only)

Updated 9 months ago

HIBAG • Rank 14.7 • Science 26%

R package – HLA Genotype Imputation with Attribute Bagging (development version only)

Updated 9 months ago

gwasrapidd • Rank 12.9 • Science 13%

gwasrapidd: an R package to query, download and wrangle GWAS Catalog data

Updated 9 months ago

pairsnp • Rank 6.8 • Science 10%

A set of scripts for calculating pairwise SNP distance

Updated 9 months ago

https://github.com/babinyurii/virus-genome-assembly-using-ngs-data • Science 13%

workflow and notes on large virus genome assembly and snp call using FastQC, Trimmomatic, bowtie2, and samtools.

Updated 9 months ago

germlineshortv_biovalidation • Science 39%

Workflow for biological validation of germline SNP and indel variant datasets.

Updated 9 months ago

get_mnv • Science 57%

Identifies multiple SNVs within the same codon, reclassifies them as MNVs, and accurately computes resulting amino acid changes from genomic reads

Updated 9 months ago

snip • Science 44%

A utility package handling Single Nucleotide polymorphism data in Python