RT-utils
RT-utils: A Minimal Python Library for RT-struct Manipulation - Published in JOSS (2025)
pfla
pfla: A Python Package for Dental Facial Analysis using Computer Vision and Statistical Shape Analysis - Published in JOSS (2018)
Open Source Optical Coherence Tomography Software
Open Source Optical Coherence Tomography Software - Published in JOSS (2020)
torchxrayvision
TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
butter2d
Butterworth filter for spatial frequencies on images. Includes a WASM demo
https://github.com/brianmanderson/dicom_rt_and_images_to_mask
Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images
https://github.com/cbica/captk
Cancer Imaging Phenomics Toolkit (CaPTk) is a software platform to perform image analysis and predictive modeling tasks. Documentation: https://cbica.github.io/CaPTk
https://github.com/cbica/dlicv
A repository that allows users to apply the DLICV method to their brain imaging data.
osparc-iseg
The Medical Image Segmentation Tool Set (iSEG) is a fully integrated segmentation (including pre- and postprocessing) toolbox for the efficient, fast, and flexible generation of anatomical models from various types of imaging data
kaapana
Kaapana is an open source toolkit for state of the art platform provisioning in the field of medical data analysis. The applications comprise AI-based workflows and federated learning scenarios with a focus on radiological and radiotherapeutic imaging. The name Kaapana comes from the Hawaiian word kaʻāpana, meaning "distributor" or "part".
https://github.com/biointelligence-lab/imflow
ImFlow: A better image dataset loader for TensorFlow