spanishoddata • Rank 5.6 • Science 77%

Access national high-quality and open-access datasets on movement patterns derived from mobile telephone datasets / Accede y usa datos nacionales abiertos sobre movimientos basados en teléfonos móviles.

spatsoc • Rank 15.0 • Science 67%

:package: spatsoc is an R package for detecting spatial and temporal groups in GPS relocations.

gigs — Peer-reviewed • Rank 4.0 • Science 77%

gigs: A package for standardising fetal, neonatal, and child growth assessment - Published in JOSS (2025)

frictionless • Rank 13.9 • Science 67%

R package to read and write Frictionless Data Packages

2021-data-and-software-class • Rank 3.8 • Science 77%

Material and script for the data and software class.

verovio • Rank 21.4 • Science 59%

🎵 Music notation engraving library for MEI with MusicXML and Humdrum support and various toolkits (JavaScript, Python)

kairos • Rank 3.1 • Science 77%

Analysis of Chronological Patterns from Archaeological Count Data - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/kairos

movepub • Rank 3.0 • Science 77%

R package to prepare animal tracking data from Movebank for publication in a research repository, GBIF or OBIS

arkhe • Rank 3.0 • Science 77%

Tools for cleaning rectangular data - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/arkhe

impindicator • Rank 2.7 • Science 77%

Compute impact indicators of invasive alien species

folio • Rank 2.6 • Science 77%

Datasets for Teaching Archaeology and Palaeontology - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/folio

dimensio • Rank 2.4 • Science 77%

Multivariate Data Analysis - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/dimensio

webchem • Rank 20.1 • Science 59%

Chemical Information from the Web

tesselle • Rank 1.9 • Science 77%

Easily Install and Load tesselle Packages - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/tesselle

knitcitations • Rank 19.9 • Science 59%

:package: Generate citations for knitr markdown and html files

doi-check-app • Rank 1.8 • Science 77%

A GitHub app that checks for DOI links in the README.md file of a repository and warns the user if no DOI is found.

alkahest • Rank 1.6 • Science 77%

Pre-Processing XY Data from Experimental Methods - :exclamation: This is a read-only mirror from https://codeberg.org/tesselle/alkahest

maptiles • Rank 16.6 • Science 62%

Download, compose and display map tiles with R

rcrisp • Rank 11.3 • Science 67%

Automate the morphological delineation of riverside urban areas.

RefManageR — Peer-reviewed • Rank 19.2 • Science 59%

RefManageR: Import and Manage BibTeX and BibLaTeX References in R - Published in JOSS (2017)

pubarchiver • Rank 6.1 • Science 72%

Package up microPublication.org and other journals for archiving into Portico and PMC

DIVAnd • Rank 11.0 • Science 67%

DIVAnd performs an n-dimensional variational analysis of arbitrarily located observations

vol2birdR • Rank 10.8 • Science 67%

R package for the vol2bird algorithm: generate vertical profiles of biological signals in weather radar data

augmentedRCBD • Rank 10.7 • Science 67%

Analysis of Augmented Randomised Complete Block Design

rsi • Rank 10.6 • Science 67%

Code for Retrieving STAC Information, addressing Repeated Spatial Infelicities and interfacing with Rsome Spectral Indices

SEP — Peer-reviewed • Rank 18.6 • Science 59%

SEP: Source Extractor as a library - Published in JOSS (2016)

FedData • Rank 18.4 • Science 59%

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources

chopin • Rank 10.4 • Science 67%

Computation of Spatial Data by Hierarchical and Objective Partitioning of Inputs for Parallel Processing http://doi.org/10.1016/j.softx.2025.102167

waywiser • Rank 10.3 • Science 67%

Ergonomic tooling to assess models of spatial data

tanaka • Rank 15.1 • Science 62%

Tanaka Maps with R

biomartr • Rank 17.9 • Science 59%

Genomic Data Retrieval with R

germinationmetrics • Rank 9.8 • Science 67%

Seed Germination Indices and Curve Fitting

RNeXML • Rank 17.8 • Science 59%

Implementing semantically rich NeXML I/O in R

taxizedb • Rank 17.5 • Science 59%

Tools for Working with Taxonomic SQL Databases

forcis • Rank 9.5 • Science 67%

Handle the FORCIS foraminifera database

ammistability • Rank 9.0 • Science 67%

Additive Main Effects and Multiplicative Interaction Model Stability Parameters

getdist • Rank 16.9 • Science 59%

MCMC sample analysis, kernel densities, plotting, and GUI

parsl • Rank 21.8 • Science 54%

Parsl - a Python parallel scripting library

ggsignif • Rank 21.5 • Science 54%

Easily add significance brackets to your ggplots

qa-catalogue • Rank 8.2 • Science 67%

QA Catalogue – a metadata quality assessment tool for library catalogue records (MARC, PICA, UNIMARC)

rdocdump • Rank 8.1 • Science 67%

rdocdump: Dump ‘R’ Package Source, Documentation, and Vignettes into One File

sits • Rank 16.0 • Science 59%

Satellite image time series in R

SpatialPosition • Rank 12.7 • Science 62%

R package for computing spatial position models

pointblank • Rank 20.7 • Science 54%

Data quality assessment and metadata reporting for data frames and database tables

lauenn • Rank 7.4 • Science 67%

LaueNN- neural network training and prediction routine to index single and polycrystalline Laue diffraction patterns

EvaluateCore • Rank 7.3 • Science 67%

Quality Evaluation of Core Collections

geodist • Rank 17.1 • Science 57%

Ultra lightweight, ultra fast calculation of geo distances

maremma • Rank 17.0 • Science 57%

Ruby utility library for network calls

rxylib • Rank 14.1 • Science 59%

R package: wrapper for the C++ library `xylib`

ecmwfr • Rank 14.0 • Science 59%

Interface to the public ECMWF API Web Services

hydroroot • Rank 6.0 • Science 67%

Simulation of hydraulic root architecture

datapackager • Rank 13.8 • Science 59%

An R package to enable reproducible data processing, packaging and sharing.

commonpy • Rank 10.8 • Science 62%

Collection of common Python utility functions and classes used in other Caltech Library programs.

ames • Rank 10.6 • Science 62%

Automated Metadata Service

gamma • Rank 13.5 • Science 59%

Dose Rate Estimation from In-Situ Gamma-Ray Spectrometry Measurements

lightr — Peer-reviewed • Rank 13.4 • Science 59%

lightr: import spectral data and metadata in R - Published in JOSS (2019)

epinowcast • Rank 8.1 • Science 64%

Tools to enable flexible and efficient hierarchical nowcasting of epidemiological time-series using a semi-mechanistic Bayesian model with support for a range of reporting and generative processes.

agnpy • Rank 13.0 • Science 59%

Modelling jetted Active Galactic Nuclei radiative processes with python

dromics • Rank 13.0 • Science 59%

Dose Response for Omics

sperrorest • Rank 15.0 • Science 57%

Spatial error estimation and variable importance

tidyBdE • Rank 15.0 • Science 57%

R package that helps to retrieve data from Banco de España

rnpn • Rank 17.9 • Science 54%

R client for the National Phenology Network database API

TreeDist • Rank 12.8 • Science 59%

Calculate distances between phylogenetic trees in R

tabula — Peer-reviewed • Rank 4.7 • Science 67%

tabula: An R Package for Analysis, Seriation, and Visualization of Archaeological Count Data - Published in JOSS (2019)

MTA • Rank 9.6 • Science 62%

Multiscalar Territorial Analysis

TreeSearch • Rank 12.5 • Science 59%

R package for phylogenetic tree search under inapplicable-corrected parsimony and custom optimality criteria

giscoR • Rank 14.3 • Science 57%

Download geospatial data from GISCO API - Eurostat

rcarb • Rank 12.1 • Science 59%

R package 'RCarb'

py-dataset • Rank 9.0 • Science 62%

Python package of dataset (https://github.com/caltechlibrary/dataset) for working with JSON objects as collections on disc

geopressurer • Rank 4.0 • Science 67%

Global positioning by atmospheric pressure

emodnet.wfs • Rank 4.0 • Science 67%

Access EMODnet Web Feature Service data through R

udocker • Rank 21.8 • Science 49%

A basic user tool to execute simple docker containers in batch or interactive systems without root privileges.

Quartet • Rank 11.8 • Science 59%

R package to calculate the similarity of two trees based on the number of shared four-taxon subtrees (or splits)

nbgrader • Rank 21.7 • Science 49%

A system for assigning and grading notebooks

valh • Rank 8.7 • Science 62%

Interface between R and the OpenStreetMap-based routing service Valhalla

priorsense • Rank 13.4 • Science 57%

priorsense: an R package for prior diagnostics and sensitivity

g-tomo • Rank 3.2 • Science 67%

G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. Extraction of 1d profiles and 2d maps (slices)

rogue • Rank 11.1 • Science 59%

Identify rogue taxa in phylogenetic trees within R

mapSpain • Rank 13.1 • Science 57%

R package with the administrative boundaries of Spain, including CCAA, provinces and municipalities

caltechthesis • Rank 3.0 • Science 67%

A test version of CaltechTHESIS on InvenioRDM

hyper2 • Rank 16.0 • Science 54%

ctlearn • Rank 11.0 • Science 59%

Deep Learning for IACT Event Reconstruction

foliage • Rank 7.9 • Science 62%

Foliage is the FOLIo chAnGe Editor, a tool to do bulk changes in FOLIO using the network API.

archaeophases • Rank 10.9 • Science 59%

Post-processing MCMC Simulations for Chronological Modelling

mxnet.sharp • Rank 15.8 • Science 54%

.NET Standard bindings for Apache MxNet with Imperative, Symbolic and Gluon Interface for developing, training and deploying Machine Learning models in C#. https://mxnet.tech-quantum.com/

ctaplot • Rank 10.7 • Science 59%

Plotting library for CTA and other IACT

climaemet • Rank 12.7 • Science 57%

R Climate AEMET Tools

pypenred • Rank 10.5 • Science 59%

Parallel Engine for Radiation Energy Deposition

wesanderson • Rank 20.5 • Science 49%

A Wes Anderson color palette for R

BioCor • Rank 15.4 • Science 54%

Package to calculate functional similarity between genes https://biocor.llrs.dev

pymeep • Rank 12.3 • Science 57%

free finite-difference time-domain (FDTD) software for electromagnetic simulations

eprints2bags • Rank 7.0 • Science 62%

Download records and documents from an EPrints server and put them in BagIt format.

finbif • Rank 1.9 • Science 67%

R interface for the Finnish Biodiversity Information Facility (FinBIF) API

nominatimlite • Rank 11.9 • Science 57%

Lite interface for getting data from OSM geocoder service.

mapsf • Rank 6.8 • Science 62%

Thematic cartography with R

dataciteapi • Rank 3.7 • Science 65%

A Golang package and command line utility for working with the public DataCite API

rfishbase • Rank 19.6 • Science 49%

R interface to the fishbase.org database

pokapi • Rank 6.5 • Science 62%

Simple Python object-oriented interface for getting records from FOLIO

eprints2archives • Rank 6.4 • Science 62%

Send records from an EPrints server to the Internet Archive and other web archives

g-tomo-3d • Rank 1.4 • Science 67%

G-Tomo (Galactic Tomography) app for exploitation of 3d dust extinction in the local galaxy. 3d visualiser (slice & annotate)