Scientific Computational Imaging Code (SCICO) — Peer-reviewed • Rank 13.0 • Science 98%

Scientific Computational Imaging Code (SCICO) - Published in JOSS (2022)

LenslessPiCam — Peer-reviewed • Rank 10.2 • Science 100%

LenslessPiCam: A Hardware and Software Platform for Lensless Computational Imaging with a Raspberry Pi - Published in JOSS (2023)

FastVPINNs — Peer-reviewed • Rank 8.3 • Science 100%

FastVPINNs: An efficient tensor-based Python library for solving partial differential equations using hp-Variational Physics Informed Neural Networks - Published in JOSS (2024)

PyUnfold — Peer-reviewed • Rank 10.7 • Science 95%

PyUnfold: A Python package for iterative unfolding - Published in JOSS (2018)

DIRECT — Peer-reviewed • Rank 7.6 • Science 98%

DIRECT: Deep Image REConstruction Toolkit - Published in JOSS (2022)

GraphSL — Peer-reviewed • Rank 7.3 • Science 95%

GraphSL: An Open-Source Library for Graph Source Localization Approaches and Benchmark Datasets - Published in JOSS (2024)

PxMCMC — Peer-reviewed • Rank 6.4 • Science 95%

PxMCMC: A Python package for proximal Markov Chain Monte Carlo - Published in JOSS (2023)

simpeg • Rank 18.9 • Science 77%

Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications.

discretize • Rank 18.2 • Science 77%

Discretization tools for finite volume and inverse problems.

harmonica • Rank 16.9 • Science 67%

Forward modeling, inversion, and processing gravity and magnetic data

pints • Rank 18.3 • Science 62%

Probabilistic Inference on Noisy Time Series

atmospheric-inverse-methods-for-flux-optimization • Rank 2.6 • Science 77%

Functions for optimizing surface fluxes of some tracer to be consistent with atmospheric measurements of that tracer.

PyProximal - scalable convex optimization in Python — Peer-reviewed • Rank 13.2 • Science 59%

PyProximal - scalable convex optimization in Python - Published in JOSS (2024)

fno-nf.jl • Rank 2.5 • Science 59%

Solving multiphysics-based inverse problems with learned surrogates and constraints

https://github.com/forieux/qmm • Rank 7.5 • Science 46%

Python Quadratic Majorization-Minimization (MM) optimization algorithms of half-quadratic criteria. Inverses problems, image restoration, denoising, ...

https://github.com/madsjulia/geostatinversion.jl • Rank 5.4 • Science 46%

Geostatistical Inversion

https://github.com/bayesflow-org/awesome-amortized-inference • Rank 5.5 • Science 36%

This is a community-driven collection of resources around amortized inference.

ceit • Rank 7.0 • Science 23%

Python Package for EIT(Electric Impedance Tomography)-like problems using Gauss-Newton method.

https://github.com/astro-informatics/darkmappy • Rank 5.0 • Science 23%

Scalable mapping of the dark universe

mud • Rank 9.0 • Science 13%

indigo • Rank 8.4 • Science 10%

High-Performance Structured Linear Operators

epi • Science 44%

EPI is a python package for inverse parameter inference

deepinv • Science 54%

DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning

eispy2d • Science 67%

An Open-Source Python Library for the development of algorithms for 2D Electromagnetic Inverse Scattering Problems.

NMRInversions.jl, a Julia package for time-domain Nuclear Magnetic Resonance — Peer-reviewed • Science 98%

NMRInversions.jl, a Julia package for time-domain Nuclear Magnetic Resonance - Published in JOSS (2025)

https://github.com/openthermochronology/thermochron.jl • Science 39%

Open-source time-Temperature inversion of thermochronometric data

SciMLWorkshop • Science 26%

Workshop materials for training in scientific computing and scientific machine learning

https://github.com/casus/pde-learning • Science 26%

Learning Partial Differential Equations by Spectral Approximates of General Sobolev Spaces

fredipy • Science 67%

Inverting Fredholm integral equations using Gaussian Processes

sfrc • Science 49%

sFRC: To detect hallucinated regions in medical images reconstructed using AI

deconv_code_data • Science 57%

Deconvolution of the growth law equation. Theory and experiments published at https://doi.org/10.5194/gi-11-293-2022

chaosmagpy • Science 67%

ChaosMagPy is a simple Python package for evaluating the CHAOS geomagnetic field model and other models of Earth's magnetic field.

https://github.com/albertocuadra/inverse_problems • Science 13%

A collection of inverse problems (e.g., reconstruction of databases, algebraic reconstruction, topological derivatives, gravitational prospecting)

3pnn • Science 41%

Code and source data used in the article "3D printed biomimetic cochleae and machine learning co-modelling provides clinical informatics for cochlear implant patients" (Lei et al. Nature Communications, 2021). The code is used for modelling the relationship between electric field imaging (EFI) profiles and the electro-anatomical features of cochleae using a multilayer perceptron (MLP) artificial neural network (NN) model.

manifold_lifting • Science 67%

Accompanying code for 'Manifold lifting: scaling MCMC to the vanishing noise regime'