Pingouin — Peer-reviewed • Rank 23.6 • Science 95%

Pingouin: statistics in Python - Published in JOSS (2018)

PreliZ — Peer-reviewed • Rank 17.8 • Science 98%

PreliZ: A tool-box for prior elicitation - Published in JOSS (2023)

uravu — Peer-reviewed • Rank 10.4 • Science 100%

uravu: Making Bayesian modelling easy(er) - Published in JOSS (2020)

statsExpressions — Peer-reviewed • Rank 16.3 • Science 93%

statsExpressions: R Package for Tidy Dataframes and Expressions with Statistical Details - Published in JOSS (2021)

bayes-toolbox — Peer-reviewed • Rank 10.4 • Science 98%

bayes-toolbox: A Python package for Bayesian statistics - Published in JOSS (2023)

ParaMonte — Peer-reviewed • Rank 13.2 • Science 95%

ParaMonte: A high-performance serial/parallel Monte Carlo simulation library for C, C++, Fortran - Published in JOSS (2021)

geostan — Peer-reviewed • Rank 12.1 • Science 95%

geostan: An R package for Bayesian spatial analysis - Published in JOSS (2022)

ChainoPy — Peer-reviewed • Rank 8.9 • Science 98%

ChainoPy: A Python Library for Discrete Time Markov Chain Based Stochastic Analysis - Published in JOSS (2024)

UBayFS — Peer-reviewed • Rank 8.0 • Science 95%

UBayFS: An R Package for User Guided Feature Selection - Published in JOSS (2023)

minorbsem — Peer-reviewed • Rank 3.0 • Science 95%

minorbsem: An R package for structural equation models that account for the influence of minor factors - Published in JOSS (2023)

BAT • Rank 12.7 • Science 85%

A Bayesian Analysis Toolkit in Julia

ChiRP — Peer-reviewed • Rank 3.3 • Science 93%

ChiRP: Chinese Restaurant Process Mixtures for Regression and Clustering - Published in JOSS (2019)

BayesFlow — Peer-reviewed • Rank 17.3 • Science 77%

BayesFlow: Amortized Bayesian Workflows With Neural Networks - Published in JOSS (2023)

bambi • Rank 21.4 • Science 67%

BAyesian Model-Building Interface (Bambi) in Python.

Turing • Rank 19.4 • Science 59%

Bayesian inference with probabilistic programming.

archaeophases • Rank 10.9 • Science 59%

Post-processing MCMC Simulations for Chronological Modelling

Taweret — Peer-reviewed • Rank 5.5 • Science 59%

Taweret: a Python package for Bayesian model mixing - Published in JOSS (2024)

mvgam • Rank 13.7 • Science 49%

{mvgam} R 📦 to fit Dynamic Bayesian Generalized Additive Models for multivariate modeling and forecasting

https://github.com/bat/mgvi.jl • Rank 4.4 • Science 54%

Metric Gaussian Variational Inference

https://github.com/aesara-devs/aeppl • Rank 19.5 • Science 36%

Tools for an Aesara-based PPL.

bayesplay • Rank 8.5 • Science 44%

The Bayesian playground. A package for learning Bayes factors

Soss • Rank 11.0 • Science 41%

Probabilistic programming via source rewriting

bfw • Rank 9.4 • Science 33%

Framework for conducting Bayesian analyses

Decision_Analysis_Course • Rank 5.4 • Science 36%

🎓 Uni-Bonn Decision Analysis graduate course, lectures and materials

https://github.com/cbg-ethz/jnotype • Rank 2.5 • Science 36%

Probabilistic modeling of high-dimensional binary data in JAX

https://github.com/andreas-bauer/at-study • Rank 2.3 • Science 36%

shinybrms • Rank 12.3 • Science 26%

An R package providing a GUI ('shiny' app) for the R package 'brms'.

https://github.com/arviz-devs/posteriorstats.jl • Rank 7.4 • Science 26%

Statistical analyses for Bayesian workflows

https://github.com/connordonegan/surveil • Rank 8.0 • Science 23%

Public Health Surveillance

bayesDP • Rank 13.0 • Science 10%

Tools for the Bayesian Discount Prior Function

goldilocks • Rank 8.4 • Science 13%

Implement Goldilocks Bayesian adaptive design for time-to-event outcomes using a piecewise exponential distribution.

bn-based-learning-networks-with-noisy-gates • Science 49%

calisim-examples-workshop-material • Science 44%

Workshop for calisim: A toolbox for the calibration and evaluation of simulation models.

https://github.com/baggepinnen/turing2montecarlomeasurements.jl • Science 23%

Interface between Turing.jl and MonteCarloMeasurements.jl

deconv_code_data • Science 57%

Deconvolution of the growth law equation. Theory and experiments published at https://doi.org/10.5194/gi-11-293-2022

Luminescence • Science 49%

Development of the R package 'Luminescence'

abms • Science 13%

Tools to perform model selection alongside estimation under Linear, Logistic, Negative binomial, Quantile, and Skew-Normal regression. Under the spike-and-slab method, a probability for each possible model is estimated with the posterior mean, credibility interval, and standard deviation of coefficients and parameters under the most probable model.

coevolve • Science 49%

coevolve R package for Bayesian generalized dynamic phylogenetic models using Stan

ExtendedRtIrtModeling • Science 44%

Extended Response Time Item Response Models with Polya-Gamma Sampler and Bayesian Quantile Regression.

HuraultMisc • Science 36%

Personal R package

NonparametricVI • Science 67%

Particle-based and nonparametric variational methods for approximate Bayesian inference and Probabilistic Programming

intro-bayesian-statistics-training • Science 49%

SIB course on bayesian statistics with applications using Rstan

Brusa_et_al_2024_Ecosphere • Science 39%

Contains data and code for Brusa et al. 2024. Correcting for measurement errors in a long-term aerial survey with auxiliary photographic data. Ecosphere DOI: 10.1002/ecs2.4961.

pyhaics • Science 44%

Python Library for Hamiltonian Markov-Chain Monte-Carlo in Computational Statistics (pyHaiCS).

bcf-iv • Science 67%

Package for heterogeneous causal effects in the presence of imperfect compliance (e.g., instrumental variables, fuzzy regression discontinuity designs)

archaeochron • Science 26%

Bayesian Modeling of Archaeological Chronologies

baylum • Science 49%

Chronological Bayesian models integrated for Optically Stimulated Luminescence (OSL) Dating

dry-tortugas-calibration-fun • Science 67%

Replicates the Sr/Ca calibration of DeLong et al. 2011

posteriorplots.jl • Science 41%

Graphical tools for Bayesian inference and posterior predictive checks

inlatools • Science 44%

An R package with useful functions to diagnose INLA models

Tilde • Science 18%

WIP successor to Soss.jl

https://github.com/annajenul/ubayfspy • Science 23%

UBayFS in Python