Scientific Software
Updated 6 months ago

Pubmed Parser — Peer-reviewed • Rank 19.4 • Science 100%

Pubmed Parser: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset XML Dataset - Published in JOSS (2020)

Scientific Software
Updated 6 months ago

fortran-src — Peer-reviewed • Rank 16.8 • Science 100%

fortran-src: Fortran static analysis infrastructure - Published in JOSS (2025)

Engineering
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

f90nml - A Python module for Fortran namelists — Peer-reviewed • Rank 19.8 • Science 95%

f90nml - A Python module for Fortran namelists - Published in JOSS (2019)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

gotranx — Peer-reviewed • Rank 10.4 • Science 100%

gotranx: General ODE translator - Published in JOSS (2024)

Mathematics (37%)
Scientific Software · Peer-reviewed
Updated 6 months ago

rdflib • Rank 31.4 • Science 77%

RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.

Scientific Software
Updated 6 months ago

yadg — Peer-reviewed • Rank 13.3 • Science 95%

yadg: yet another datagram - Published in JOSS (2022)

Mathematics
Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

ms3 — Peer-reviewed • Rank 12.4 • Science 95%

ms3: A parser for MuseScore files, serving as data factory for annotated music corpora - Published in JOSS (2023)

Scientific Software
Updated 6 months ago

Nominally — Peer-reviewed • Rank 6.2 • Science 100%

Nominally: A Name Parser for Record Linkage - Published in JOSS (2021)

Scientific Software
Updated 6 months ago

General binary file parser. — Peer-reviewed • Rank 9.2 • Science 95%

General binary file parser. - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Updated 6 months ago

gnparser • Rank 8.8 • Science 77%

GNparser normalises scientific names and extracts their semantic elements.

Updated 6 months ago

fr.inria.gforge.spoon:spoon-core • Rank 19.7 • Science 57%

Spoon is a metaprogramming library to analyze and transform Java source code. :spoon: is made with :heart:, :beers: and :sparkles:. It parses source files to build a well-designed AST with powerful analysis and transformation API.

Updated 5 months ago

https://github.com/markedjs/marked • Rank 37.6 • Science 36%

A markdown parser and compiler. Built for speed.

Updated 6 months ago

json_repair • Rank 26.6 • Science 44%

A python module to repair invalid JSON from LLMs

Updated 6 months ago

org.webjars.npm:nearley • Rank 13.0 • Science 57%

📜🔜🌲 Simple, fast, powerful parser toolkit for JavaScript.

Updated 6 months ago

pronto • Rank 19.2 • Science 49%

A Python frontend to (Open Biomedical) Ontologies.

Updated 6 months ago

graph-csr-openmp • Rank 0.7 • Science 67%

Design of high-performance OpenMP-based parallel Graph Edgelist and Compressed Sparse Row (CSR) loader, aka GVEL.

Updated 6 months ago

tree-sitter-ssh-client-config • Rank 15.3 • Science 44%

tree-sitter grammar for SSH client configuration files

Updated 6 months ago

rigolwfm • Rank 12.2 • Science 46%

Parsers for .wfm binary files created by a wide range of Rigol oscilloscopes

Updated 6 months ago

textx • Rank 21.2 • Science 36%

Domain-Specific Languages and parsers in Python made easy http://textx.github.io/textX/

Updated 6 months ago

bvhio • Rank 12.0 • Science 44%

Read, write, edit and create .bvh files with hierarchical 3D transforms

Updated 6 months ago

generic_parser • Rank 9.7 • Science 46%

A parser for arguments and config files that also allows direct Python input and recursive parsing

Updated 6 months ago

url-search-params • Rank 10.3 • Science 44%

`url-search-params` provides ability to create search params (query string) from HashMap and vice versa.

Updated 6 months ago

PDDL • Rank 8.8 • Science 44%

Julia parser, interpreter and compiler interface for the Planning Domain Definition Language (PDDL). Planners not included.

Updated 6 months ago

mgz • Rank 15.2 • Science 36%

Age of Empires II recorded game parsing and summarization in Python 3.

Updated 6 months ago

forensicsim • Rank 6.0 • Science 44%

A forensic open-source parser module for Autopsy that allows extracting the messages, comments, posts, contacts, calendar entries and reactions from a Microsoft Teams IndexedDB LevelDB database.

Updated 6 months ago

MonkeyLang • Rank 8.0 • Science 41%

"Writing an Interpreter in GO" and "Writing a Compiler in GO" in Julia.

Updated 6 months ago

sixarm_ruby_unaccent • Rank 3.6 • Science 44%

SixArm.com » Ruby » Unaccent replaces a string's accented characters with ASCII characters.

Updated 6 months ago

lynx-html-to-text • Rank 1.1 • Science 44%

lynx-html-to-text: use the lynx web browser to convert HTML to plain text

Updated 6 months ago

markdown-tools • Rank 1.1 • Science 44%

SixArm.com » Markdown » Scripts for parsing markdown

Updated 6 months ago

splitp • Rank 7.6 • Science 36%

Python package that implements split- and rank-based tools for inferring phylogenies, such as flattenings and subflattenings.

Updated 6 months ago

obonet • Rank 16.6 • Science 26%

OBO-formatted ontologies → networkx (Python 3)

Updated 5 months ago

https://github.com/cheminfo/mzdata • Rank 3.2 • Science 39%

Read and explore mzData files.

Updated 6 months ago

bibtex • Rank 18.5 • Science 23%

bibtex parser for R

Updated 5 months ago

https://github.com/barrust/mediawiki • Rank 16.3 • Science 23%

MediaWiki API wrapper in python http://pymediawiki.readthedocs.io/en/latest/

Updated 5 months ago

https://github.com/ami-iit/rod • Rank 13.1 • Science 26%

The ultimate Python tool for RObot Descriptions processing.

Updated 5 months ago

https://github.com/flobee/spss • Rank 15.2 • Science 23%

PHP library for reading and writing SPSS or PSPP files

Updated 6 months ago

pe • Rank 11.3 • Science 26%

Fastest general-purpose parsing library for Python with a familiar API

Updated 5 months ago

https://github.com/bramvanroy/spacy_conll • Rank 12.6 • Science 23%

Pipeline component for spaCy (and other spaCy-wrapped parsers such as spacy-stanza and spacy-udpipe) that adds CoNLL-U properties to a Doc and its sentences and tokens. Can also be used as a command-line tool.

Updated 4 months ago

https://github.com/fanchengyan/myst-sphinx-gallery • Rank 9.8 • Science 23%

A Sphinx extension that builds galleries from myst-style markdown, notebook or rst files.

Updated 6 months ago

http-sfv • Rank 13.5 • Science 13%

Parse and serialise HTTP structured field values

Updated 6 months ago

nuclear • Rank 10.3 • Science 13%

Binding glue for CLI Python applications

Updated 5 months ago

https://github.com/andstor/latex-math-parser • Rank 3.9 • Science 13%

:wrench: Parser for parsing LaTeX math expressions

Updated 6 months ago

genomediff-write • Rank 5.9 • Science 10%

GenomeDiff (*.gd) file parser for Python

Updated 4 months ago

https://github.com/dcavar/treebankparser • Rank 1.8 • Science 13%

Parser for treebanks based on Penn Treebank type of encoding that generates Probabilistic Context Free Grammars

Updated 5 months ago

https://github.com/aggrathon/rustcalculator • Rank 0.0 • Science 13%

A commandline calculator written in Rust

Updated 6 months ago

parzer • Science 39%

Parse geographic coordinates

Updated 5 months ago

parcr • Science 39%

Construct parser combinators in R

Updated 6 months ago

gov.nasa.pds:pds3-product-tools • Science 26%

Library supporting the design/generation, validation and submission of PDS3 archival products.

Updated 5 months ago

https://github.com/bytedance/dolphin • Science 36%

The official repo for “Dolphin: Document Image Parsing via Heterogeneous Anchor Prompting”, ACL, 2025.

Updated 6 months ago

lector • Science 44%

A fast reader for messy CSV files with optional type inference.

Updated 5 months ago

https://github.com/danielgatis/go-vte • Science 13%

A library to parse terminal escape sequences (almost) exactly how the real hardware does.

Updated 6 months ago

treeio • Science 49%

:seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

Updated 6 months ago

Constructs • Science 31%

[WIP] A declarative deserialization-serialization for binary data. Inspired by Construct.

Updated 6 months ago

iustcompiler • Science 44%

IUST Compiler Design: Principles, Techniques, and Tools

Updated 5 months ago

https://github.com/breandan/yuri • Science 26%

👨‍🚀 A type-safe URI builder in Kotlin

Updated 5 months ago

https://github.com/michaelhatherly/lexbor.jl • Science 26%

Julia wrapper for https://github.com/lexbor/lexbor

Updated 5 months ago

https://github.com/cedergrouphub/limesoup • Science 23%

LimeSoup is a package to parse HTML or XML papers from different publishers.

Updated 6 months ago

sixarm_html_scripts • Science 44%

SixArm.com » HTML » Scripts for parsing markup

Updated 6 months ago

pdbrust • Science 44%

A Rust library for parsing PDB (Protein Data Bank) files

Updated 5 months ago

https://github.com/bamresearch/masterdata-parser-example • Science 26%

An example parser for openBIS using the bam-masterdata interface.

Updated 6 months ago

mmi-parser • Science 52%

MMI Parser written with love in Rust.

Updated 6 months ago

gmshparsercpp • Science 44%

C++17 parser for GMSH mesh files

Updated 6 months ago

url-build-parse • Science 44%

`url-build-parse` provides the ability to parse URL from string as well as construct URL from parts.

Updated 5 months ago

https://github.com/xinmengbcr/moltopolparser • Science 13%

A lightweight package to parse and process molecular simulation files