pyorganoid
A Python package for the simulation of organoids for the purpose of studying Organoid Intelligence (OI) and Organoid Learning (OL).
contextual-anomaly-detector
Contextual anomaly detection tool application in building energy field based on Matrix Profile algorithm
symbolfit
Automatic parametric modeling with symbolic regression [Comput Softw Big Sci 9, 12 (2025)]
ngclearn
NGC-Learn: Neurobiological Systems Design and Simulation in Python
software-engineer
A curated learning repository focused on High-Performance Computing (HPC) — covering fundamentals to advanced topics in CUDA, MPI, C++, and Python-C++ interoperability.
neuropyxels
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
mukh
A comprehensive face analysis library that provides unified APIs for various face-related tasks
https://github.com/centrefordigitalhumanities/gabber
A project for the Data School.
pipelines
Custom JWST reduction pipelines for NIRSpec and MIRI Solar System observations
qiskit-addon-cutting
Reduce width and depth of quantum circuits by cutting gates and wires.
trustpy-tools
TrustPy is a production-ready Python package purpose-built for MLOps pipelines—enabling automated, interpretable analysis of model trustworthiness and predictive reliability before deployment. Available via Conda-Forge and PyPI, with full CI/CD integration and seamless compatibility across modern ML stacks.
PathSim - A System Simulation Framework
PathSim - A System Simulation Framework - Published in JOSS (2025)
EXP
EXP: a Python/C++ package for basis function expansion methods in galactic dynamics - Published in JOSS (2025)
pengWann
pengWann: Descriptors of chemical bonding from Wannier functions - Published in JOSS (2025)
COHESIVM
COHESIVM: Combinatorial h+/e- Sample Investigation using Voltaic Measurements - Published in JOSS (2025)
ngl_tools
A collection of tools developed by the Next Generation Liquefaction modelers.
btllib
btllib: A C++ library with Python interface for efficient genomic sequence processing - Published in JOSS (2022)
figuratenum
Figuratenum is the most comprehensive Python library for figurate numbers, capable of generating up to 233 different sequences across various dimensions and generalizations. Based on the book ‘Figurate Numbers’ (2012) by Elena Deza and Michel Deza.
insect-detect
Detection models and Python scripts for automated insect monitoring with the Insect Detect DIY camera trap.
oopoa
Python implementation of the Object-Oriented Programming Optimization Algorithm (OOPOA). A CLI-based metaheuristic optimizer inspired by encapsulation and inheritance. Based on the 2024 paper by Hosny et al.
ondil
A package for online distributional learning.
python_to_grbl
A simple open-source python 🐍 to grbl 🤖 sender || Controlling 3-axis GRBL/CNC/gcode machines with python over a serial/usb connection that waits for completion of movement before sending the next command
skltest
Python library to compare the performance obtained by models available in Scikit-learn to solve regression and classification problems. It is possible to evaluate the influence of successive resampling and optimize the hyperparameters through a K-fold cross-validation holdout.
beshie-mental-health-chatbot
Beshie is here to help you navigate through your emotions and provide you with the guidance you need to feel better.
annodash
[JAMIA Open] A clinical terminology annotation dashboard created using Plotly Dash & the MIMIC-IV database.
rafmetrics
Metrics for evaluating the performance and complexity of computer programs
many-types-4-py-dataset
ManyTypes4Py: A benchmark Python dataset for machine learning-based type inference
automatedfreesurfer
basicrta
Bayesian nonparametric inference of ligand binding kinetics from molecular dynamics simulations.
ua-opc-interface
This UA OPC Interface is a Python-based application that provides a versatile and user-friendly interface for controlling laboratory pumps via OPC UA protocol. This application is specifically tailored for such applications, allowing users to automate and monitor the operation of pumps with ease and accuracy.
msannika_csm_annotation
Calculates Intensities of Cross-linked Peptides from MS Annika CSMs.
elaspy
A discrete-event simulator of the emergency response process of electric and diesel ambulances.
multi-shared-task-self-supervised-cnn-lstm
Multi-shared-task Self-supervised Learning utilizing CNN-LSTM network
bildersammlung-buddhismus-public
Dataset of the University of Basel's research seminar "Indexing and Digital Processing of a Historical Image Collection on the Appropriation of Buddhism in the West"
final-year-project
Chatalyst: React Messaging Application with Integrated AI for Smart Replies.
scanexitronlr
A package for the characterization and quantification of exitron splicing events in long-read RNA-seq
scikit-plots
An intuitive library that seamlessly adds plotting capabilities and functionality to any model objects or outputs, compatible with tools like scikit-learn, XGBoost, TensorFlow, and more.
opendata_sandbox
This repository contains the code for the manuscript Ensemble-labeling of infectious diseases time series to evaluate early warning systems with which you can reproduce the manuscript's results and figures.
deep_learning_topology_opt
Code for paper "Self-Directed Online Machine Learning for Topology Optimization"
MRN-AI-Plate-Parameter-Estimation
Machine Learning for Solving the Inverse Problem of Estimating Plate Properties from Modal Responses
uyghur-multi-script-converter
This converter converts multiple Uyghur scripts: ULS(Uyghur Latin Script), UAS(Uyghur Arabic Script), CTS(Common Turkick Scritp), UCS(Uyghur Cyrilik Script) and Uyghur Yengi (new) Script.
metrics-releases-in-python
Analysis of Static Metrics Across Releases in Python Language Repositories on GitHub.
clean-code
Training materials and slides for courses on version control, clean code and documentation with practical examples and exercises in Python and R
janus-llm
Leveraging LLMs for modernization through intelligent chunking, iterative prompting and reflection, and retrieval augmented generation (RAG).
whisper_api
The objective of this repository is make a basic a functional speech to text api configurable and escalable . The api use a powerful speech to text model, whisper,
motor_fault_detection_brb
Motor fault detection with ML using SVM, GBM, and ANN.
github-crawler
The GitHub Crawler is a Python-based project that utilizes the GitHub API to fetch and crawl data related to commits and pull requests from various repositories. It's a tool designed for developers who want to analyze the activity in a GitHub repository. The crawler can fetch data about commits, pull requests, pull commits, pull files, pull reviews
breast_cancer_diagnosis_ml
This project demonstrates the use of machine learning models to predict breast cancer diagnoses. The repository covers the entire workflow from data preprocessing and feature engineering to model training and evaluation, providing insights into diagnosis prediction with various ML models.
stm-cluster-heightzer
Stm cluster heights resizer (stm-cluster-heightzer) is a class that finds peaks of clusters (high bumps) in a scanning tunneling microscope (STM) image(data) and if necessary corrects the heights of the individual clusters to the surrounding surface.
mwydyn
A fully-automated, multiple velocity component, hyperfine line fitting code.
gufo-traceroute
Gufo Traceroute is the Python asyncio IPv4 traceroute implementation.
speadi
A Python package that aims to characterise the dynamics of local chemical environments from Molecular Dynamics trajectories of proteins and other biomolecules. Public mirror of https://gitlab.jsc.fz-juelich.de/slbio/speadi.
fireveg-db-imports
Fire Ecology database - Code for database imports and data curation
nlg-metricverse
[COLING22] An End-to-End Library for Evaluating Natural Language Generation
iddroadsegmentation
Distinguishing Urban Roads from Non-Road Regions in the Indian Driving Dataset(IDD) Using Binary Deep Learning Segmentation 🛣️
pyleco
Python implementation of the Laboratory Experiment COntrol (LECO) protocol
ascvit
Repository for the article in the online magazine Towards Data Science.
jaxngp
JAX implementation of instant-ngp (NeRF part)
