DataDepsGenerators.jl
DataDepsGenerators.jl: making reusing data easy by automatically generating DataDeps.jl registration code - Published in JOSS (2018)
openresearchcalendar.github.io
Documentation & Code for the community tool: 'Open Research Calendar'
cchsflow
Variable transformation and harmonization for the Canadian Community Health Survey
https://github.com/openpmd/openpmd-validator
:ballot_box_with_check: Validator and Example Scripts
teaching_reproducible_science_r
Material and notes for teaching reproducible science in R
2022-10-31-oscsa-online
This is a workshop organised by OSCSA for sFDA staff
https://github.com/amnh/hackthesolarsystem
The 5th Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
https://github.com/amnh/hackthedeep
The 4th Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
https://github.com/amnh/hackthedinos
The 2nd Annual American Museum of Natural History Hackathon produced by the BridgeUP: STEM program
https://github.com/andim/optimmune
Source code accompanying the paper "How a well-adapted immune system is organized"
https://github.com/arcaravaggi/biol-env-2-1-11-2017
Materials relevant to Caravaggi et al 2017 Bio Env 2:1-11 doi: 10.3318/bioe.2017.08
https://github.com/andim/paper-tcellexp
Source code accompanying the paper "Regulation of T cell expansion by antigen presentation dynamics "
appian
APPIAN is an open-source automated software pipeline for analyzing PET images in conjunction with MRI. The goal of APPIAN is to make PET tracer kinetic data analysis easy for users with moderate computing skills and to facilitate reproducible research.
search-query
Search Query: A Python package designed to load, lint, translate, save, improve, and automate academic literature search queries.
https://github.com/alexslemonade/openscpca-analysis
An open, collaborative project to analyze data from the Single-cell Pediatric Cancer Atlas (ScPCA) Portal
https://github.com/coderefinery/hpc-containers
Lesson about containers for HPC with focus on Apptainer.
https://github.com/andim/transitions-paper
Source code accompanying the paper "Transitions in optimal adaptive strategies for populations in fluctuating environments"
https://github.com/andim/evolimmune
Source code accompanying the paper "Diversity of immune strategies explained by adaptation to pathogen statistics"
https://github.com/andim/paper-bayesimmune
Source code accompanying the paper "How a well-adapting immune system remembers"
