FluoPi
Code and teaching materials for UC/BackyardBrains raspberry pi "macro" scope.
https://github.com/bids-apps/mrtrix3_connectome
Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.
https://github.com/biomedsciai/dpm360
Repository for Disease Progression Modeling workbench 360 - An end-to-end deep learning model training framework in python on OMOP data
https://github.com/cgentemann/cloud_science
NASA cloud science tutorials and science use cases
https://github.com/bytedance/lynx-llm
paper: https://arxiv.org/abs/2307.02469 page: https://lynx-llm.github.io/
https://github.com/cutright/dvh-analytics
A DICOM Database Application for Radiation Oncology
disaggregator
A set of tools for processing of spatial and temporal disaggregations.
GWASinlps
R package for Non-local Prior Based Iterative Variable Selection for Genome-Wide Association Studies, or Other High-Dimensional Data
https://github.com/aiidateam/aiida-gui
Web UI to visualize and manage the AiiDA.
https://github.com/alicerunsonfedora/renpy-textmate
Support for the Ren'Py language in TextMate and editors with TextMate bundles
@stdlib/utils-async-series-waterfall
Execute functions in series, passing the results of one function as arguments to the next function.
editorial
Configuration, documentation, and curation regarding Editorial for iOS.
https://github.com/bayer-group/bic-subscreen
Interactive visualization to explore subgroup effects
swot-opentoolkit
Community codes for processing SWOT data. This is a community code repo, does not include the algorithms that belong to the project.
demography
Quickly load demographic data based on UK post codes to enrich your dataset. Based on data made available by the UK's Office for National Statistics (ONS).
https://github.com/astropenguin/xarray-custom
:zap: Data classes for custom xarray creation
sea_ice_drift
Sea ice drift from Sentinel-1 SAR imagery using open source feature tracking
https://github.com/aim-uofa/oir
[ICLR 2024] Official PyTorch/Diffusers implementation of "Object-aware Inversion and Reassembly for Image Editing"
https://github.com/bytedance/gr-1
Code for "Unleashing Large-Scale Video Generative Pre-training for Visual Robot Manipulation"
cbayes
Python library implementing the Consistent Bayes framework for stochastic inverse problems
rmetl
rMETL - realignment-based Mobile Element insertion detection Tool for Long read
https://github.com/campbio/musicatk
Mutational Signature Comprehensive Analysis Toolkit
https://github.com/adbar/py3langid
Faster, modernized fork of the language identification tool langid.py
mygene
mygene is an easy-to-use Python wrapper to access MyGene.Info services.
https://github.com/tummfm/jax-dimenet
Jax / Haiku implementation of DimeNet++.
https://github.com/axiom-data-science/docker-erddap
A feature full Tomcat (SSL over APR, etc.) running ERDDAP
@stdlib/utils-map3d
Apply a function to each nested element in a three-dimensional nested array and assign the result to a nested element in a new three-dimensional nested array.
https://github.com/biocomputingup/ngx-mol-viewers
Angular wrapper for Mol* structure viewer, made simple
https://github.com/actinia-org/actinia-parallel-plugin
This is the actinia parallel plugin for faster processing (WIP).
nrex
nRex: Germline and somatic single-nucleotide, short indel and structural variant calling
https://github.com/aphp/ig-fhir-dm
FHIR Implementation Guide for Data Management
https://github.com/cantera/cantera-papers
Suggest papers to be featured on the Cantera website
https://github.com/alpaka-group/bashi
A library to provide a job generator for CI's for alpaka based projects.
https://github.com/bionanoimaging/psfdistiller.jl
Distills a point spread function (PSF) from a measurement of beads by selecting local maxima that are separate enough from other ones.
https://github.com/csoneson/duoclustering2018
R package with data sets and clustering results from Duò et al (F1000Research 2018)
https://github.com/combustiontoolbox/combustion_toolbox_website
Source code of the official website of Combustion Toolbox
practicalstats-pucsp-2024
Statistical Measures in Python - Age and Salary Analysis
https://github.com/anselmoo/dracula-palette
🧛🏻♂️ Advanced Color Harmony Generator - Transform any color into comprehensive Dracula-themed palettes
https://github.com/annakrystalli/nox_spp-list
NERC grant application fro project: Assessing the efficacy and costs of noxious species lists, a common policy tool in invasive species management.
https://github.com/ambarja/geoidep
📥 Download geographic data on various topics provided and managed by the Spatial Data Infrastructure of Peru 🌎🌐.
https://github.com/astrazeneca/machine-learning-for-predicting-targeted-protein-degradation
The code was developed for training diverse ML and DL models to predict PROTACs degradation. Data cleaning for two public datasets, PROTAC-DB and PROTACpedia, are also included. PROTACs are of high interest for all disease areas of AZ and thus predicting their degradation is of general interest.
https://github.com/apertium/apertium-website
Scripts for apertium.org and beta.apertium.org
Iceberg-locations
Current Antarctic large iceberg positions derived from ASCAT and OSCAT-2
https://github.com/bionanoimaging/nanoimagingpack
Python pack for nanoimaging-related tasks
https://github.com/bkahlert/kustomize
Kotlin-based customizer for IoT images like Raspberry Pi OS
https://github.com/agrdatasci/documentation
https://agrdatasci.github.io/documentation/
https://github.com/bernard-ng/drc-news-app
DRC News Corpus : Towards a scalable and intelligent system for Congolese News curation
spruce
Enrichment pipeline for CUR reports which adds energy and carbon data allowing to report and reduce the impact of the your cloud usage.
https://github.com/cossio/pfam.jl
Julia package to interact with the Pfam database.
https://github.com/amueller/advanced_training
Advanced Scikit-learn training session
https://github.com/alpa-projects/alpa
Training and serving large-scale neural networks with auto parallelization.
cartesian
a lightweight implementation of Cartesian genetic programming with symbolic regression in mind.
ElecSus
A python program to calculate the weak-probe electric susceptibility of an atomic ensemble.