https://github.com/bio-phys/pydiffusion
Analyse Rotational Diffusion Tensor from MD Simulations
https://github.com/ami-iit/paper_ramadoss_2021_icra_proprioceptive-base-estimator
[ICRA 2021] DILIGENT-KIO IEEE Xplore: https://ieeexplore.ieee.org/abstract/document/9561248 arXiv: https://arxiv.org/abs/2105.14914
console
Comprehensive utility library for terminals. “Better… Stronger… Faster.”
https://github.com/dcavar/speechsignal
Speech signal processing, supra-segmental phonology, prosody
spikeextractors
Python-based module for extracting from, converting between, and interfacing with many common file formats in extracellular recording.
LACE
LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution analyses for single-cell sequencing data, including longitudinal experiments. The tool also allows to annotate and retrieve the relevant variants based on user-defined criteria.
ATbounds
Bounding Treatment Effects by Pooling Limited Information across Observations
https://github.com/chaoss/grimoirelab-sigils
Panels from GrimoireLab dashboards
https://github.com/agahkarakuzu/sunrise
NumPy, SciPy, MRI and Music | Presented at ISMRM 2021 Sunrise Educational Session
https://github.com/compvis/distilldift
[WACV 2025] DistillDIFT: Distillation of Diffusion Features for Semantic Correspondence
https://github.com/chadagreene/cmocean
Perceptually uniform cmocean colormaps in MATLAB.
https://github.com/azavea/transit-center-viz
Visualization of US public transportation ridership data along with key population and socioeconomic variables
https://github.com/bioconductor/tenxbrainanalysis
R scripts for analyzing the 1.3 million brain cell data set from 10X Genomics
https://github.com/adamouization/corona-virus-insights-dashboard
Coronavirus dashboard visualisations entirely designed in D3.JS
https://github.com/adaptivemotorcontrollab/llavaction
SEMID
SEMID: an R package for parameter identifiability in linear structural equation models
LT-GEE
Google Earth Engine implementation of the LandTrendr spectral-temporal segmentation algorithm. For documentation see:
mplleaflet
Easily convert matplotlib plots from Python into interactive Leaflet web maps.
https://github.com/arogozhnikov/infiniteboost
InfiniteBoost: building infinite ensembles with gradient descent
isocon
Derives consensus sequences from a set of long noisy reads by clustering and error correction.
https://github.com/ami-iit/paper_lerario_2022_humanoids_planning-multimodal-locomotion
Repository associated with the paper "Whole-Body Trajectory Optimization for Robot Multimodal Locomotion".
https://github.com/cvxgrp/miqp_admm
ADMM for Mixed-Integer Quadratic Programming
GeoDiff
GeoDiff, an R package for count generating models for analyzing Geomx RNA data. Note that this version of the package is still under development, undergoing submission process to Bioconductor 3.14 release and still needs to complete NanoString internal verification process.
fastDummies
The goal of fastDummies is to quickly create dummy variables (columns) and dummy rows.
https://github.com/4turesearchdata-carpentries/workshop_notes
[PILOT] Repository of the command histories ("notes") for all lessons of all Carpentries workshops using gitautopush
https://github.com/amueller/ml-workshop-short
Two hour interactive machine learning workshop
https://github.com/cjabradshaw/australiansharkincidentdatabase
The Australian Shark-Incident Database (ASID) for quantifying temporal and spatial patterns of shark-human conflict in Australia
https://github.com/fastai/fastpages
An easy to use blogging platform, with enhanced support for Jupyter Notebooks.
https://github.com/alpacahq/marketstore
DataFrame Server for Financial Timeseries Data
https://github.com/arogozhnikov/rtg_score
Rank-To-Group score evaluates contribution of confounding factors
https://github.com/annakrystalli/rrtools-repro-research
Tutorial on Reproducible Research in R with rrtools
https://github.com/abidlabs/classify-surahs
Can We Build a Classifier for Meccan and Medinan Surahs?
icecream-tutorials
Tutorials for Earth from Above: Env 329 Using NASA Satellite Data (ECOSTRESS) for Real-Time Environmental Monitoring
https://github.com/bio-phys/hplusminus
Statistical tests to detect and quantify correlations in residuals when fitting models to one-dimensional data.
https://github.com/ami-iit/paper_ramadoss-2022-iros-humanoid-base-estimation
[IROS 2022] EKF Comparison - Humanoid Base Estimators; IEEE Xplore: https://ieeexplore.ieee.org/document/9982275
ramascene
RaMa-Scene a web-platform to analyse Environmentally Extended Input-Output data and generate scenarios
https://github.com/asjadnaqvi/covid19-european-regional-tracker
Tracking the spread of COVID-19 across NUTS3 (NUTS2 for PL and EL) regions for 26 European countries.
https://github.com/cytoscape/cytoscape-admin-scripts
Build and maintenance scripts for Cytoscape core developers.
https://github.com/aksw/erfurt
PHP5 / Zend based Semantic Web API for Social Semantic Software
https://github.com/andreasvc/readability
Measure the readability of a given text using surface characteristics
https://github.com/marcnuth/anomalydetection
Twitter's Anomaly Detection in Pure Python
https://github.com/ai-forever/mcp_giga_checker
MCP server for detecting AI-generated text using GigaChat API.
https://github.com/annakrystalli/checklist-demo
Reproducible Research Checklist examples
https://github.com/andrew/state-of-oss-funding
The State of OSS Funding data: Insights from ecosyste.ms - talk at CHAOSScon North America 2025
tsep_illustrative_example
The transmission system expansion project application to study illustrative three-nodes energy system
https://github.com/chrynan/redacted
Kotlin components to redact sensitive information from `toString` output.
https://github.com/chadnpc/devconstants
Constants /codes for development and ITOPs.
https://github.com/cjabradshaw/africachildhealth
Data and R code to reproduce analyses examining socio-economic and environmental determinants of child-health outcomes among African nations
https://github.com/billbrod/inkscape-figure-example
Example of how to script figure creation with inkscape and python
https://github.com/billbrod/literature
Files to import literature from Mendeley into org mode and keep updated
https://github.com/bagustris/wav2vec2-indonesian
Implementasi wav2vec2 untuk bahasa Indonesia
https://github.com/beomi/tf-keras-on-lambda
Example Repo for Tensorflow + Keras on AWS Lambda
https://github.com/antho8101/oridium
Oridium - A powerful and modular blockchain core engine designed for high-performance applications, inspired by Bitcoin.
https://github.com/ZenSam7/Easy_My_AI
Библиотека для создания ИИ, написана ПОЛНОСТЬЮ с нуля
https://github.com/aadya940/pycoding
An Agentic Python Library and CLI Tool to automate Coding tutorial generation.
https://github.com/data-miner00/dotfiles_old
A place to keep my Windows configuration files
https://github.com/clemense/kitchen-assets-cc-by
Multiple kitchen assets as OBJ and URDF
https://github.com/curent/pv-curve-llm
Create and analyze simple P-V Curves for Voltage Stability analysis using natural language