autonomics • Rank 3.3 • Science 23%

SPsimSeq • Rank 13.3 • Science 13%

Semi-parametric simulation of bulk and single cell RNA-seq data

rgrass7 • Rank 13.3 • Science 13%

Interpreted interface between the GRASS geographical information system and R

https://github.com/fl33tw00d/whisper-turbo • Rank 13.3 • Science 13%

Cross-Platform, GPU Accelerated Whisper 🏎️

https://github.com/cytoscape/cytoscape.js-arbor • Rank 6.3 • Science 20%

The Arbor physics simulation layout for Cytoscape.js

https://github.com/abidlabs/deep-learning-genomics-primer • Rank 6.3 • Science 20%

Contains files for the deep learning in genomics primer.

suncalc • Rank 13.3 • Science 13%

R package for calculating sun/moon positions and phases, linked to suncalc.js

https://github.com/castelao/directip • Rank 13.3 • Science 13%

Iridium SBD Direct-IP (satellite communication)

https://github.com/bramvanroy/charcut • Rank 8.3 • Science 18%

Character-based MT evaluation and difference highlighting

weathermetrics • Rank 16.3 • Science 10%

https://github.com/adapter-hub/xgqa • Rank 3.3 • Science 23%

ratecounter • Rank 3.3 • Science 23%

Phylogenetic Rate Counter

https://github.com/awegroup/awera • Rank 3.3 • Science 23%

Airborne Wind Energy Resource Analysis tool (AWERA) is meant to provide wind resource classification/representation and power harvesting estimation for AWES. It builds on wind profile clustering techniques used by Mark Schelbergen (TU Delft).

nst • Rank 3.3 • Science 23%

Normalized Stochasticity Ratio in community assembly

https://github.com/adonath/scipy-2023-pydantic-tutorial • Rank 3.3 • Science 23%

Repository with draft content for the Pydantic tutorial at SciPy 2023

https://github.com/adrn/ebak • Rank 3.3 • Science 23%

https://github.com/aryashah2k/grass-is-greener • Rank 3.3 • Science 23%

Naughty GitHub Actions For Automated Commits

rospca • Rank 13.3 • Science 13%

Robust Sparse PCA using the ROSPCA algorithm of Hubert et al. (2016)

mzstudio • Rank 6.3 • Science 20%

The mzStudio Proteomic Mass Spectrometry Analysis Tool

hydrostats • Rank 16.3 • Science 10%

Calculate hydrologic indices from daily streamflow data

rlinkedin • Rank 16.2 • Science 10%

Dev version of access to LinkedIn API via R

BANDITS • Rank 13.2 • Science 13%

BANDITS: Bayesian ANalysis of DIfferenTial Splicing

ward-metrics • Rank 6.2 • Science 20%

Implementation of the event-based evaluation metrics for activity recognition tasks proposed by Ward et. all

ciccr • Rank 6.2 • Science 20%

Causal Inference in Case-Control Studies

https://github.com/compomics/meta-proteome-analyzer • Rank 6.2 • Science 20%

MetaProteomeAnalyzer (MPA) software for analyzing and visualizing MS-based metaproteomics data.

optimParallel • Rank 13.2 • Science 13%

https://github.com/astropenguin/xarray-compare • Rank 3.2 • Science 23%

:zap: xarray extension for data comparison

deeptcr • Rank 6.2 • Science 20%

Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

ImmuneSpaceR • Rank 16.2 • Science 10%

An R Interface to the ImmuneSpace database portal

mltools • Rank 16.2 • Science 10%

Exploratory and diagnostic machine learning tools for R

pyd • Rank 16.2 • Science 10%

Interoperability between Python and D

heat-pump-tutorial • Rank 3.2 • Science 23%

oemof workshop on modeling heat pumps

https://github.com/cqcl/peropq • Rank 3.2 • Science 23%

Perturbative Optimization for Hamiltonian Simulation

https://github.com/brandmaier/pdc • Rank 3.2 • Science 23%

pdc: An R Package for Complexity-Based Clustering of Time Series

gecevar • Rank 3.2 • Science 23%

:package: :earth_americas: :mountain: :sunny: :cloud: :seedling: Get climatic and other environmental variables

https://github.com/computer-vision-in-the-wild/eccv-2022 • Rank 3.2 • Science 23%

https://computer-vision-in-the-wild.github.io/eccv-2022/

https://github.com/alleninstitute/cns_2021 • Rank 3.2 • Science 23%

Resources for Allen Instutite tutorials presented at CNS 2021

emtable • Rank 3.2 • Science 23%

Simple module to deal with EM tabular data (aka metadata)

diffutr • Rank 3.2 • Science 23%

The diffUTR R package streamlines differential exon usage (DEU) analyses, and leverages existing DEU tools and alternative poly-adenylation site databases to enable differential 3' UTR usage analysis.

cladecompare • Rank 3.2 • Science 23%

https://github.com/cthoyt/embeddingdb • Rank 3.2 • Science 23%

A database for storing and comparing entity embeddings

https://github.com/althonos/pymuscle5 • Rank 3.2 • Science 23%

Cython bindings and Python interface to MUSCLE v5, a highly efficient and accurate multiple sequence alignment software.

https://github.com/alleninstitute/glif2nest • Rank 3.2 • Science 23%

GLIF (Generalized Leaky Integrate and Fire) Models for NEST Simulator

https://github.com/cityjson/restful_demo • Rank 3.2 • Science 23%

rtdists • Rank 16.2 • Science 10%

RT distributions in R

gather • Rank 13.2 • Science 13%

Gather -- collect all your plugins!

python-libaio • Rank 13.2 • Science 13%

Python wrapper for libaio

venn • Rank 13.2 • Science 13%

Draw Venn Diagrams

https://github.com/axa-group/nlp.js • Rank 13.2 • Science 13%

An NLP library for building bots, with entity extraction, sentiment analysis, automatic language identify, and so more

https://github.com/awslabs/project-lakechain • Rank 13.1 • Science 13%

:zap: Cloud-native, AI-powered, document processing pipelines on AWS.

SomaticSignatures • Rank 16.1 • Science 10%

The SomaticSignatures package offers the framework for identifying mutational signatures of single nucleotide variants (SNVs) from high-throughput experiments.

https://github.com/mtgoncurve/landlord • Rank 13.1 • Science 13%

Magic: The Gathering mulligan and card draw simulator

https://github.com/cytoscape/network-merge • Rank 3.1 • Science 23%

Core App: Network Merge

https://github.com/cbg-ethz/5-virus-mix • Rank 3.1 • Science 23%

Benchmarking data sets for haplotype reconstruction methods, sequenced with Illumina MiSeq, 454/Roche GSJunior, and Pacific Biosciences

https://github.com/aloy/lmeresampler • Rank 16.1 • Science 10%

R package for resampling multilevel models

senta • Rank 13.1 • Science 13%

Baidu's open-source Sentiment Analysis System.

open-climate-investing • Rank 6.1 • Science 20%

Application and data for analyzing and structuring portfolios for climate investing.

https://github.com/timesynth/timesynth • Rank 13.1 • Science 13%

A Multipurpose Library for Synthetic Time Series Generation in Python

EloRating • Rank 13.1 • Science 13%

Animal dominance hierarchies

mobi • Rank 13.1 • Science 13%

python based software to unpack kindlegen generated ebooks

https://github.com/martinbiel/stochasticprograms.jl • Rank 6.1 • Science 20%

Julia package for formulating and analyzing stochastic recourse models.

qrqc • Rank 16.1 • Science 10%

Quick Read Quality Control

DSSP • Rank 6.1 • Science 20%

mvnfast • Rank 16.1 • Science 10%

Fast methods for multivariate normal distributions

match • Rank 13.1 • Science 13%

Match tokenized words and phrases within the original, untokenized, often messy, text.

https://github.com/alan-turing-institute/notice-board • Rank 3.1 • Science 23%

Community notice board for the Turing Institute

https://github.com/aaronpeikert/dodontprereg • Rank 3.1 • Science 23%

https://github.com/cbg-ethz/sgs • Rank 3.1 • Science 23%

Inference in Bayesian Networks with R

https://github.com/crsh/cognitive_models • Rank 3.1 • Science 23%

Collection of my implementations of computational models of cognition

sustainability-scanner • Rank 13.1 • Science 13%

pymuvr • Rank 6.1 • Science 20%

Fast multi-unit Van Rossum spike train metric

paco • Rank 13.1 • Science 13%

Small utility library for coroutine-driven asynchronous generic programming in Python

https://github.com/aazuspan/wxee • Rank 13.1 • Science 13%

A Python interface between Earth Engine and xarray for processing time series data

MOSS • Rank 13.1 • Science 13%

MOSS: Multi-Omic integration via Sparse Singular Decomposition

cleanTS • Rank 8.1 • Science 18%

R package for univariate time series cleaning.

lassie • Rank 16.0 • Science 10%

Web Content Retrieval for Humans™

DAP • Rank 6.0 • Science 20%

Discriminant analysis via projections, R package

imager • Rank 16.0 • Science 10%

R package for image processing

https://github.com/advrhumanoids/concert_resources • Rank 3.0 • Science 23%

Module description files and meshes of the CONCERT robot platform. Used by https://github.com/ADVRHumanoids/modular_hhcm

https://github.com/csinva/glaucoma-diagnosis • Rank 3.0 • Science 23%

Code for diagnosing glaucoma from Lumos lens

https://github.com/bat/bat-julia-tutorial • Rank 3.0 • Science 23%

BAT/Julia tutorial for DESY Statistics School

https://github.com/danforthcenter/apps-phenotyping • Rank 3.0 • Science 23%

The following are scripts and instruction necessary to set up 4 Raspberry Pi Powered Imaging Platforms

https://github.com/apertium/apertium-fin • Rank 3.0 • Science 23%

Finnish monolingual data and morphological analyser-generator for apertium

GSgalgoR • Rank 13.0 • Science 13%

An evolutionary Algorithm for the Identification and Study of Prognostic Gene Expression Signatures in Cancer (Bioconductor)

zigzag • Rank 13.0 • Science 13%

Python library for identifying the peaks and valleys of a time series.

https://github.com/cosmiq/solaris • Rank 16.0 • Science 10%

CosmiQ Works Geospatial Machine Learning Analysis Toolkit

LowWAFOMSobol • Rank 6.0 • Science 20%

Low WAFOM Sobol Sequence

https://github.com/bytedance/byteps • Rank 16.0 • Science 10%

A high performance and generic framework for distributed DNN training

https://github.com/adriangb/xpresso • Rank 13.0 • Science 13%

A composable Python ASGI web framework

runibic • Rank 13.0 • Science 13%

UniBic Biclustering algorithm for R

ndtv • Rank 16.0 • Science 10%

ndtv: Network Dynamic Temporal Visualizations in R

https://github.com/ahasverus/ahasverus.github.io • Rank 0.0 • Science 26%

:globe_with_meridians: Nicolas Casajus' website

pcap-toolkit • Rank 0.0 • Science 26%

PCAP Dataset

firesale • Rank 0.0 • Science 26%

Data Store for 'fiery' web servers

cites-database • Rank 0.0 • Science 26%

Database of citation relationships

https://github.com/bagustris/vpython-demo • Rank 0.0 • Science 26%

Some plot and animation using vpython, from many source

https://github.com/asadm/socialsentiments-homepage • Rank 0.0 • Science 26%

https://github.com/biswesh456/machine-learning • Rank 0.0 • Science 26%

This repo contains some of my implementation of some well known algorithms and some research papers.

https://github.com/bird-house/birdhouse-deploy-image-updater • Rank 0.0 • Science 26%

https://github.com/billbrod/sphinx-tutorial • Rank 0.0 • Science 26%

Introduction to python docs sites.