Intracranial Electrode Location and Analysis in MNE-Python
Intracranial Electrode Location and Analysis in MNE-Python - Published in JOSS (2022)
MNE-BIDS
MNE-BIDS: Organizing electrophysiological data into the BIDS format and facilitating their analysis - Published in JOSS (2019)
HNN-core
HNN-core: A Python software for cellular and circuit-level interpretation of human MEG/EEG - Published in JOSS (2023)
Reducing the efforts to create reproducible analysis code with FieldTrip
Reducing the efforts to create reproducible analysis code with FieldTrip - Published in JOSS (2024)
NeuroAnalyzer
NeuroAnalyzer: Julia toolbox for analyzing neurophysiological data - Published in JOSS (2025)
fooof
Parameterizing neural power spectra into periodic & aperiodic components.
brainstorm3
Brainstorm software: MEG, EEG, fNIRS, ECoG, sEEG and electrophysiology
https://github.com/braindatalab/calibrain
Python framework for uncertainty estimation and calibration in EEG/MEG inverse source imaging.
https://github.com/cbrnr/timewarp
Time-warping variable-length EEG epochs for time/frequency analysis
cpp_ptb
a set of function to make it easier to create behavioral, EEG, fMRI experiment with psychtoolbox
SPM 25
SPM 25: open source neuroimaging analysis software - Published in JOSS (2025)
PyRASA - Spectral parametrization in python based on IRASA
PyRASA - Spectral parametrization in python based on IRASA - Published in JOSS (2025)
https://github.com/john-veillette/niseq
group sequential tests for neuroimaging
oscillationmethods
Methodological considerations for analyzing and interpreting neural oscillations.
eCobidas
Working repository to turn the COBIDAS guidelines to report methods and results in neuroimaging into a user friendly checklist