tpcp
tpcp: Tiny Pipelines for Complex Problems - A set of framework independent helpers for algorithms development and evaluation - Published in JOSS (2023)
pointcloudset
pointcloudset: Efficient Analysis of Large Datasets of Point Clouds Recorded Over Time - Published in JOSS (2021)
Pywaterflood
Pywaterflood: Well connectivity analysis through capacitance-resistance modeling - Published in JOSS (2024)
regional-mom6
regional-mom6: A Python package for automatic generation of regional configurations for the Modular Ocean Model 6 - Published in JOSS (2024)
BioPsyKit
BioPsyKit: A Python package for the analysis of biopsychological data - Published in JOSS (2021)
GTFS Segments
GTFS Segments: A Fast and Efficient Library to Generate Bus Stop Spacings - Published in JOSS (2024)
abcvoting
abcvoting: A Python package for approval-based multi-winner voting rules - Published in JOSS (2023)
EPyT-Flow
EPyT-Flow: A Toolkit for Generating Water Distribution Network Data - Published in JOSS (2024)
Nanomesh
Nanomesh: A Python workflow tool for generating meshes from image data - Published in JOSS (2022)
LenslessPiCam
LenslessPiCam: A Hardware and Software Platform for Lensless Computational Imaging with a Raspberry Pi - Published in JOSS (2023)
MF2
MF2: A Collection of Multi-Fidelity Benchmark Functions in Python - Published in JOSS (2020)
Traja
Traja: A Python toolbox for animal trajectory analysis - Published in JOSS (2021)
pridepy
pridepy: A Python package to download and search data from PRIDE database - Published in JOSS (2025)
ZodiPy
ZodiPy: A Python package for zodiacal light simulations - Published in JOSS (2024)
AnyPyTools
AnyPyTools: A Python package for reproducible research with the AnyBody Modeling System - Published in JOSS (2019)
SPEI
SPEI: A Python package for calculating and visualizing drought indices - Published in JOSS (2025)
planetMagFields
planetMagFields: A Python package for analyzing and plotting planetary magnetic field data - Published in JOSS (2024)
matbench-genmetrics
matbench-genmetrics: A Python library for benchmarking crystal structure generative models using time-based splits of Materials Project structures - Published in JOSS (2024)
SLEPLET
SLEPLET: Slepian Scale-Discretised Wavelets in Python - Published in JOSS (2023)
timeseriesflattener
timeseriesflattener: A Python package for summarizing features from (medical) time series - Published in JOSS (2023)
PyVBMC
PyVBMC: Efficient Bayesian inference in Python - Published in JOSS (2023)
pDEMtools
pDEMtools: conveniently search, download, and process ArcticDEM and REMA products - Published in JOSS (2024)
Emiproc
Emiproc: A Python package for emission inventory processing - Published in JOSS (2025)
PythonicDISORT
PythonicDISORT: A Python reimplementation of the Discrete Ordinate Radiative Transfer package DISORT - Published in JOSS (2024)
PyBCI
PyBCI: A Python Package for Brain-Computer Interface (BCI) Design - Published in JOSS (2023)
biopeaks
biopeaks: a graphical user interface for feature extraction from heart- and breathing biosignals - Published in JOSS (2020)
quickBayes
quickBayes: An analytical approach to Bayesian marginal likelihoods - Published in JOSS (2025)
rdflib
RDFLib is a Python library for working with RDF, a simple yet powerful language for representing information.
PlanetMapper
PlanetMapper: A Python package for visualising, navigating and mapping Solar System observations - Published in JOSS (2023)
bayes-toolbox
bayes-toolbox: A Python package for Bayesian statistics - Published in JOSS (2023)
idf-analysis
idf-analysis: Heavy rainfall intensity as a function of duration and return period - Published in JOSS (2025)
UQTestFuns
UQTestFuns: A Python3 library of uncertainty quantification (UQ) test functions - Published in JOSS (2023)
dantro
dantro: a Python package for handling, transforming, and visualizing hierarchically structured data - Published in JOSS (2020)
PYDAQ
PYDAQ: Data Acquisition and Experimental Analysis with Python - Published in JOSS (2023)
Bodge
Bodge: Python package for efficient tight-binding modeling of superconducting nanostructures - Published in JOSS (2024)
piglot
piglot: an Open-source Package for Derivative-free Optimisation of Numerical Responses - Published in JOSS (2024)
Fastsubtrees
Fastsubtrees: simple and efficient subtrees extractions in Python with applications to NCBI taxonomy - Published in JOSS (2022)
Bluebonnet
Bluebonnet: Scaling solutions for production analysis from unconventional oil and gas wells - Published in JOSS (2023)
ytree
ytree: A Python package for analyzing merger trees - Published in JOSS (2019)
xCDAT
xCDAT: A Python Package for Simple and Robust Analysis of Climate Data - Published in JOSS (2024)
qgs
qgs: A flexible Python framework of reduced-order multiscale climate models - Published in JOSS (2020)
FTorch
FTorch: a library for coupling PyTorch models to Fortran - Published in JOSS (2025)
Triumvirate
Triumvirate: A Python/C++ package for three-point clustering measurements - Published in JOSS (2023)
DearEIS - A GUI program for analyzing impedance spectra
DearEIS - A GUI program for analyzing impedance spectra - Published in JOSS (2022)
TorchMetrics - Measuring Reproducibility in PyTorch
TorchMetrics - Measuring Reproducibility in PyTorch - Published in JOSS (2022)
fRAT
fRAT: an interactive, Python-based tool for region-of-interest summaries of functional imaging data - Published in JOSS (2023)
Fitspy
Fitspy: A Python package for spectral decomposition - Published in JOSS (2024)
TAXPASTA
TAXPASTA: TAXonomic Profile Aggregation and STAndardisation - Published in JOSS (2023)
AddaxAI
AddaxAI: A no-code platform to train and deploy custom YOLOv5 object detection models - Published in JOSS (2023)
The Basic Model Interface 2.0
The Basic Model Interface 2.0: A standard interface for coupling numerical models in the geosciences - Published in JOSS (2020)
StreamGen
StreamGen: a Python framework for generating streams of labeled data - Published in JOSS (2024)
scholarly
Retrieve author and publication information from Google Scholar in a friendly, Pythonic way without having to worry about CAPTCHAs!
Plonk
Plonk: Smoothed particle hydrodynamics analysis and visualization with Python - Published in JOSS (2019)
Fruitbat
Fruitbat: A Python Package for Estimating Redshifts of Fast Radio Bursts - Published in JOSS (2019)
OfflineMOT
OfflineMOT: A Python package for multiple objects detection and tracking from bird view stationary drone videos - Published in JOSS (2022)
PII-Codex
PII-Codex: a Python library for PII detection, categorization, and severity assessment - Published in JOSS (2023)
ThermoParser
ThermoParser: Streamlined Analysis of Thermoelectric Properties - Published in JOSS (2024)
EcoLogits
EcoLogits: Evaluating the Environmental Impacts of Generative AI - Published in JOSS (2025)
pactus
pactus: A Python framework for trajectory classification - Published in JOSS (2023)
BlueCelluLab
BlueCelluLab: Biologically Detailed Neural Network Experimentation API - Published in JOSS (2024)
OpenTerrace
OpenTerrace: A fast, flexible and extendable Python framework for thermal energy storage packed bed simulations - Published in JOSS (2024)
RFBzero
RFBzero: A Python package for zero-dimensional simulation of redox flow battery cycling - Published in JOSS (2024)
Scanbot
Scanbot: An STM Automation Bot - Published in JOSS (2024)
fseval
fseval: A Benchmarking Framework for Feature Selection and Feature Ranking Algorithms - Published in JOSS (2022)
qiskit
Qiskit is an open-source SDK for working with quantum computers at the level of extended quantum circuits, operators, and primitives.
elmada
elmada: Dynamic electricity carbon emission factors and prices for Europe - Published in JOSS (2021)
PySwarming
PySwarming: a research toolkit for Swarm Robotics - Published in JOSS (2023)
madupite
madupite: A High-Performance Distributed Solver for Large-Scale Markov Decision Processes - Published in JOSS (2025)
rgfrosh
rgfrosh: A Python package for calculating shock conditions using real gas equations of state - Published in JOSS (2024)
WearableHRV
WearableHRV: A Python package for the validation of heart rate and heart rate variability in wearables - Published in JOSS (2024)
hdlib
hdlib: A Python library for designing Vector-Symbolic Architectures - Published in JOSS (2023)
spiketools
spiketools: a Python package for analyzing single-unit neural activity - Published in JOSS (2023)
stanscofi and benchscofi
stanscofi and benchscofi: a new standard for drug repurposing by collaborative filtering - Published in JOSS (2024)
NEMSEER
NEMSEER: A Python package for downloading and handling historical National Electricity Market forecast data produced by the Australian Energy Market Operator - Published in JOSS (2023)
Spiral
Spiral: splitters for identifiers in source code files - Published in JOSS (2018)
Ethical Smart Grid
Ethical Smart Grid: a Gym environment for learning ethical behaviours - Published in JOSS (2023)
Pynteny
Pynteny: a Python package to perform synteny-aware, profile HMM-based searches in sequence databases - Published in JOSS (2023)
cirq
Python framework for creating, editing, and invoking Noisy Intermediate-Scale Quantum (NISQ) circuits.
deepface
A Lightweight Face Recognition and Facial Attribute Analysis (Age, Gender, Emotion and Race) Library for Python
cgeniepy
cgeniepy: A Python package for analysing cGENIE Earth System Model output - Published in JOSS (2024)
Moran Pycess
Moran Pycess: a Python package to simulate Moran processes driven by game theory - Published in JOSS (2020)
pycellga
pycellga: A Python package for improved cellular genetic algorithms - Published in JOSS (2025)
PySymmPol - Symmetric Polynomials
PySymmPol - Symmetric Polynomials - Published in JOSS (2024)
pyomo
An object-oriented algebraic modeling language in Python for structured optimization problems.
pynguin
The PYthoN General UnIt Test geNerator is a test-generation tool for Python
stable-baselines3
PyTorch version of Stable Baselines, reliable implementations of reinforcement learning algorithms.
transformers
🤗 Transformers: the model-definition framework for state-of-the-art machine learning models in text, vision, audio, and multimodal models, for both inference and training.
Utopia
Utopia: A Comprehensive and Collaborative Modeling Framework for Complex and Evolving Systems - Published in JOSS (2020)
lmfit
Non-Linear Least Squares Minimization, with flexible Parameter settings, based on scipy.optimize, and with many additional classes and methods for curve fitting.
