HyperNetX
HyperNetX: A Python package for modeling complex network data as hypergraphs - Published in JOSS (2024)
kglab
Graph Data Science: an abstraction layer in Python for building knowledge graphs, integrated with popular graph libraries – atop Pandas, NetworkX, RAPIDS, RDFlib, pySHACL, PyVis, morph-kgc, pslpython, pyarrow, etc.
deepke
[EMNLP 2022] An Open Toolkit for Knowledge Graph Extraction and Construction
travshacl
A SHACL validator capable of planning the traversal and execution of the validation of a shape schema to detect violations early.
lrebench
[EMNLP 2022 Findings] Towards Realistic Low-resource Relation Extraction: A Benchmark with Empirical Baseline Study
deepsearch-toolkit
Interact with the Deep Search platform for new knowledge explorations and discoveries
odis-arch
Development of the Ocean Data and Information System (ODIS) architecture
noria-ontology
The NORIA-O project is a data model for IT networks, events and operations information. The ontology is developed using web technologies (e.g. RDF, OWL, SKOS) and is intended as a structure for realizing an IT Service Management (ITSM) Knowledge Graph (KG) for Anomaly Detection (AD) and Risk Management applications. The model has been developed in collaboration with operational teams, and in connection with third parties linked vocabularies.
awesome-drug-discovery-knowledge-graphs
A collection of research papers, datasets and software related to knowledge graphs for drug discovery. Accompanies the paper "A review of biomedical datasets relating to drug discovery: a knowledge graph perspective" (Briefings in Bioinformatics, 2022)
https://github.com/accenture/ampligraph
Python library for Representation Learning on Knowledge Graphs https://docs.ampligraph.org
https://github.com/biolink/kgx
KGX is a Python library for exchanging Knowledge Graphs
https://github.com/bluebrain/nexus
Blue Brain Nexus - A knowledge graph for data-driven science
https://github.com/simphony/simphony-osp
A framework that aims to achieve interoperability between software such as simulation engines, databases and data repositories using a knowledge graph as the common language.
knowurenvironment
Official release of KnowUREnvironment, a knowledge graph on climate change and related environmental issues. Paper link: https://www.climatechange.ai/papers/aaaifss2022/3
https://github.com/aksw/kbox
📦 The Knowledge Box - A data dependency management framework to help users to publish, find and install data models
https://github.com/bluebrain/nexus-forge
Building and Using Knowledge Graphs made easy
sparnatural
Sparnatural : visual knowledge graph explorer with SPARQL, in the browser, configurable with SHACL
https://github.com/cpu-ds/unike
基于 OpenKE-PyTorch 开发的知识图谱嵌入工具包，支持跨平台运行，具备自动超参数搜索、高效并行训练以及实验结果记录功能，为研究与应用提供强大助力。
https://github.com/biocypher/omnipath-secondary-adapter
BioCypher adapter to retrieve data from Omnipath database (Networks, Intercell, Complexes, EnzymePTM and Annotations).
https://github.com/awslabs/dgl-ke
High performance, easy-to-use, and scalable package for learning large-scale knowledge graph embeddings.
https://github.com/astrazeneca/onto_merger
OntoMerger is an ontology alignment library for deduplicating knowledge graph nodes that represent the same domain.
https://github.com/bayer-group/cmc-knowledge-graph-backend
This is submodule containing the backend related code.
https://github.com/citiususc/blinkg
BLINKG: Benchmark for LLM-Integrated Knowledge Graph Generation
https://github.com/accenture/osdu-ontology
An ontology designed for oil and gas, and subsurface energy data based on the industry standards.
https://github.com/arenas-guerrero-julian/pg2rml-star
RML-star Mapping Bootstrapper from Property Graphs
https://github.com/bluebrain/citation-graph
Blue Brain Citation & Knowledge Graph implementation in Neo4j
https://github.com/dbpedia/neural-rdf-verbalizer
🗣 Multilingual RDF Verbalizer – Google Summer of Code 2019
autocimkg
Automatic Construction and Incremental Maintenance of Knowledge Graphs
https://github.com/astrazeneca/skywalkr-graph-features
Example notebooks that illustrate how to generate knowledge-based features. Features can be used in a variety of ML models, including recommender systems.
contract-knowledge-base
A functional knowledge base of popular contracts utilized in GitHub. Built for a class project in Knowledge Reasoning and Representation (KRR).
kag
KAG is a logical form-guided reasoning and retrieval framework based on OpenSPG engine and LLMs. It is used to build logical reasoning and factual Q&A solutions for professional domain knowledge bases. It can effectively overcome the shortcomings of the traditional RAG vector similarity calculation model.
mathmoddb
The repo for MathModDB, the model ontology and knowledge graph developed by MaRDI TA4
literalkg
LiteralKG is a novel Attributed Knowledge Graph Embedding Model developed by NS Lab @ CUK based on pure PyTorch backend.
renku
Renku provides a platform and tools for reproducible and collaborative data analysis.
sac2kg
A Python package for generating RDF knowledge graphs based on the Volcano Event Ontology VEO.
pegazus-ontology
PeGaZus ontology and knowledge graph based approach to build urban historical gazetteers. Presented at EKAW 2024.
dseco
The DSecO project is a data model for representing and reasoning on Domain Name System (DNS) data. The ontology is developed using web technologies (e.g. RDF, OWL, SKOS) and is intended as a structure for realizing a DNS Knowledge Graph (KG) for administration and security assessment applications.
https://github.com/centre-for-humanities-computing/embedding-explorer
Tools for interactive visual exploration of semantic embeddings.
podio
Ontology designed to formalize the dissemination of political discourse in digital media.
Carnival
Carnival: JVM Property graph data unification toolkit - Published in JOSS (2025)
phenomics-assistant
LLM retrieval augmented generation agent for the Monarch Knowledge graph.
https://github.com/hidadeng/chinese-pretrained-word-embeddings
中文文本分析工具、语料、预训练模型相关资源汇总。
https://github.com/aksw/llm-kg-bench
LLM-KG-Bench is a Framework and task collection for automated benchmarking of Large Language Models (LLMs) on Knowledge Graph (KG) related tasks.
kg-mm-survey
Knowledge Graphs Meet Multi-Modal Learning: A Comprehensive Survey
https://github.com/aksw/sante
The Ontology, Dataset and Knowledge Search Engine
https://github.com/astrazeneca/awesome-drug-pair-scoring
Readings for "A Unified View of Relational Deep Learning for Drug Pair Scoring." (IJCAI 2022)
https://github.com/awslabs/garnet-framework
The Garnet Framework is an open-source framework that enables you to build living digital twins and context-aware solutions through dynamic knowledge graphs.
midi2vec
MIDI2vec computes embeddings for representing MIDI data in vector space
snap-umls-clusters
Master Thesis Project in Arab American University Palestine with Palestinian Neuro Initiative Educational Research Center - Clustering medical sentences based on Unified Medical Language System (UMLS) terms and expanded UMLS terms present in them
odissei-kg
This repository contains the software we used to extract, transform and load (ETL) data into the platform kg.odissei.nl. If you are mainly interested in the resulting data, feel free to ignore this repository and go to this platform directly.
openspg-kag
OpenSPG is a Knowledge Graph Engine developed by Ant Group in collaboration with OpenKG, based on the SPG (Semantic-enhanced Programmable Graph) framework. Core Capabilities: 1) domain model constrained knowledge modeling, 2) facts and logic fused representation, 3) natively support KAG...
graphg
GraphGen: Enhancing Supervised Fine-Tuning for LLMs with Knowledge-Driven Synthetic Data Generation
https://github.com/ai-team-uoa/geoquestions1089
Crowdsourced Geospatial Question-Answering dataset containing triples of question-queries-answers.
https://github.com/d1egoprog/kg-slr4llm
A resource for scientific discovery using neuro-symbolic AI and LLMs with prompts, experiments, and responses.
ontouml-json2graph
Decode a ontouml-schema compliant JSON in an ontouml-metamodel-vocabulary compliant knowledge graph
micw2graph
A knowledge graph of the wastewater treatment microbiome and its biological context
https://github.com/cefriel/competence-kg
A tutorial on Knowledge Graphs discussing how to model the employee competences within a company
textgraphs
TextGraphs + LLMs + graph ML for entity extraction, linking, ranking, and constructing a lemma graph
kgem-in-drug-discovery
Code to accompany the "Understanding the Performance of Knowledge Graph Embeddings in Drug Discovery" manuscript (Artificial Intelligence in the Life Sciences, 2022)
mpox-kg
Source code and data repository for paper titled "Monkeypox Knowledge Graph: A comprehensive representation embedding chemical entities and associated biology of Monkeypox "
biomedical-kg-topological-imbalance
Code to accompany the "Implications of Topological Imbalance for Representation Learning on Biomedical Knowledge Graphs" (Briefings in Bioinformatics, 2022)
https://github.com/d1egoprog/synthetictriples
Paper showcase for the initial version of the Synthetic Triple generation approach
https://github.com/alan-turing-institute/semaida
Semantic Technologies for the AIDA project
oeg-software-graph
Knowledge graph containing the catalog of software from the oeg-upm organization in GitHub
clep
🤖 A Python Package for generating new patient representations driven by data and prior knowledge
awesome-llms
🤓 A collection of AWESOME structured summaries of Large Language Models (LLMs)
https://github.com/aksw/frankgraphbench
The FranKGraphBench is a Framework to allow KG Aware RSs to be benchmarked in a reproducible and easy to implement manner. It was first created on Google Summer of Code 2023 for Data Integration between DBpedia and some standard RS datasets in a reproducible framework.
https://github.com/centre-for-humanities-computing/conspiracies
A python package for discovering and examining conspiracies using NLP.
xsearchkg
Source code for XSearchKG, a full-stack web application for explainable keyword search over knowledge graphs
https://github.com/citiususc/semantic-emofinder
WebApp and KG construction for emotional word datasets
bear
knowledge-based-qa-for-diagnosis
Knowledge Graph,Question Answering System. 基于知识图谱的医疗诊断问答系统