recommenderlab
recommenderlab - Lab for Developing and Testing Recommender Algorithms - R package
smoppix
Single-molecule spatial omics models analyzed through the probabilistic index
https://github.com/awslabs/aws-lambda-web-adapter
Run web applications on AWS Lambda
blas-base-sdsdot
Calculate the dot product of two single-precision floating-point vectors with extended accumulation.
fair-workflow-platform
A workflow platform using machine-actionable RO-Crates and FAIR signposting
mantra-postprocessing
Scripts for postprocessing data generated with the "MountAiN glacier Transient snowline Retrieval Algorithm".
stats-base-snanvariancewd
Calculate the variance of a single-precision floating-point strided array ignoring NaN values and using Welford's algorithm.
ai-assisted-protocol-analysis-in-design-research
Code repository for the paper "Towards AI-Assisted Protocol Analysis in Design Research: Automating Question Labeling with GPT-4 According to Eris' (2004) Taxonomy." Presented at Design Computing and Cognition’24
optimization
Reproducible results for the various types of optimization techniques I have implemented
distmsmatch
A MPI-distributed version of MSMatch integrating the PASEOS framework for physical modelling
qspace_deep_learning
Implementation codes for "Jointly estimating parametric maps of multiple diffusion models"
smesh
A simple Fortran package for generating and handling unstructured triangular and polygonal meshes
workshop_data_reuse
Data reuse saves time and accelerates the pace of scientific discovery. But how do you actually reuse the data that you put in repositories? This is a 4 hour workshop tailored to the ocean sciences. We aim to teach the basics of data reuse using ERDDAP servers maintained by ocean science specific repo's and programs and pulling these data into the Python environment.
twitter-graph
Fetch and visualize the graph of your Twitter friends and followers.
TIGERr
Technical variation elimination for metabolomics data using ensemble learning architecture
mixmod
Supervised, unsupervised and semi-supervised classification with mixture modelling
WMWssp
R package for sample size calculation for the Wilcoxon-Mann-Whitney test.
msapy
Hopefully, a compact and general-purpose Python package for Multiperturbation Shapley value Analysis (MSA).
intermediate-software-dev-r
Repo for the intermediate software development lessons in R
fairdatapoint-client
Interact with your resources (catalogs/datasets/distributions) in a FDP using python
rnachipintegrator
RnaChipIntegrator is a utility that performs integrated analyses of 'gene' data (a set of genes or other genomic features) with 'peak' data (a set of regions, for example ChIP peaks) to identify the genes nearest to each peak, and vice versa
rcbs.py
RCBS.py (Reactivity of Chemical and Biochemical Systems) is a Python package that contains several scripts, functions and classes that simplify the analysis of chemical and biochemical simulations.
lidar-notebooks
A series of jupyter notebook pipelines for processing lidar point clouds (LAS files) and deriving vegetation structure metrics.
sauterschwab3d.jl
Sauter&Schwab quadrature rules for singular tetrahedron-tetrahedron, tetrahedron-triangle and triangle-triangle interaction integrals.
pythea
PyThea is an open-source software package to perform coronal mass ejection (CME) and shock wave 3D reconstruction using multi-viewpoint remote-sensing observations.
cad-to-dagmc
Convert CAD geometry (STP files) or Cadquery assemblies to DAGMC h5m files
pyteomics
Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provides a growing set of modules to facilitate the most common tasks in proteomics data analysis.
wholeslidedata
A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
ggfortify
Define fortify and autoplot functions to allow ggplot2 to handle some popular R packages.
pdielec
PDielec is a Python package for post-processing solid state QM and MM calculations of Infrared Spectra
WaveBreaking
Detect, classify, and track Rossby Wave Breaking (RWB) in weather and climate data.
org.sakaiproject.accountvalidator:accountvalidator-api
Sakai is a freely available, feature-rich technology solution for learning, teaching, research and collaboration. Sakai is an open source software suite developed by a diverse and global adopter community.
dotpath
A Go, Python and TypeScript modules for working with map, dicts and objects accessing them using a dot path notation.
https://github.com/light-curve/light-curve-feature
Time-series feature extraction Rust crate
plc2skill
PLC2Skill is an automated method to generate skill models in the form of an ontology from existing PLC code.
QuantumFluidSpectra
Fast, accurate, and flexible spectral analysis for compressible quantum fluids
epiparameterdashboard
Explore the database of epidemiological parameters provided by the {epiparameterDB} package
KraljicMatrix
KraljicMatrix: An R package for implementing the Kraljic Matrix to strategically analyze a firm’s purchasing portfolio - Published in JOSS (2017)
KielMAT
KielMAT: Kiel Motion Analysis Toolbox - An Open-Source Python Toolbox for Analyzing Neurological Motion Data from Various Recording Modalities - Published in JOSS (2024)
3D Line Radiative Transfer & Synthetic Observations with Magritte
3D Line Radiative Transfer & Synthetic Observations with Magritte - Published in JOSS (2022)
https://github.com/arogozhnikov/demuxalot
Reliable, scalable, efficient demultiplexing for single-cell RNA sequencing
snl-quest
An open source, Python-based software platform for energy storage simulation and analysis developed by Sandia National Laboratories.
vespa
Validation of Exoplanet Signals using a Probabilistic Algorithm--- calculating false positive probabilities for transit signals
https://github.com/google-deepmind/ithaca
Restoring and attributing ancient texts using deep neural networks
https://github.com/awslabs/agent-squad
Flexible and powerful framework for managing multiple AI agents and handling complex conversations
tadar
R package for Transcriptome Analysis of Differential Allelic Representation
jupyterlab-display-name
JupyterLab server extension that adds a display name field to the login page.
https://github.com/definitelytyped/definitelytyped
The repository for high quality TypeScript type definitions.
