Scientific Software
Updated 6 months ago

Limarka — Peer-reviewed • Rank 19.3 • Science 93%

Limarka: making possible Brazilian students writing dissertation and thesis with Markdown - Published in JOSS (2017)

Scientific Software · Peer-reviewed
Scientific Software
Updated 6 months ago

highlightHTML — Peer-reviewed • Rank 7.8 • Science 93%

highlightHTML: CSS Formatting of R Markdown Documents - Published in JOSS (2018)

Scientific Software · Peer-reviewed
Updated 6 months ago

rehype-citation • Rank 18.0 • Science 77%

Rehype plugin to add citation and bibliography from bibtex files

Updated 5 months ago

https://github.com/markedjs/marked • Rank 37.6 • Science 36%

A markdown parser and compiler. Built for speed.

Updated 6 months ago

@liascript/editor • Rank 14.4 • Science 54%

Interpreter for interactive educational content, written in an extended Markdown format...

Updated 5 months ago

manubot • Rank 17.7 • Science 46%

Python utilities for Manubot: Manuscripts, open and automated

Updated 6 months ago

basic-memory • Rank 18.8 • Science 44%

AI conversations that actually remember. Never re-explain your project to Claude again. Local-first, integrates with Obsidian. Join our Discord: https://discord.gg/tyvKNccgqN

Updated 6 months ago

tocer • Rank 16.6 • Science 44%

A command line interface for generating Markdown table of contents.

Updated 6 months ago

pander • Rank 22.0 • Science 36%

An R Pandoc Writer: Convert arbitrary R objects into markdown

Updated 5 months ago

markdown • Rank 20.7 • Science 36%

A Python implementation of John Gruber’s Markdown with Extension support.

Updated 6 months ago

zotero-markdb-connect • Rank 7.0 • Science 49%

Zotero plugin that links your Markdown database to Zotero. Jump directly from Zotero Items to connected Markdown files. Automatically tags Zotero Items so you can easily see which papers you've made notes for.

Updated 6 months ago

mkdocs • Rank 32.4 • Science 23%

Project documentation with Markdown.

Updated 5 months ago

https://github.com/getrd/academic-file-converter • Rank 16.5 • Science 36%

📚 Import Bibtex publications and Jupyter Notebook blog posts into your Markdown website or book. 将Bibtex转换为Markdown网站

Updated 5 months ago

trackdown • Rank 18.0 • Science 33%

R package for collaborative writing and editing of R Markdown (or Sweave) documents in Google Docs.

Updated 5 months ago

markdown • Rank 24.9 • Science 26%

The first generation of Markdown rendering for R (born in 2012), based on commonmark. Note that this package is markdown, not *rmarkdown*.

Updated 5 months ago

komaletter • Rank 11.7 • Science 36%

R package for comfortable writing of beautiful PDF letters in Markdown.

Updated 6 months ago

taio • Rank 3.5 • Science 44%

Configurables, actions, documentation, etc. for Taio.

Updated 6 months ago

pandoc-from-markdown-to-pdf • Rank 2.8 • Science 44%

Use pandoc to convert from markdown to PDF with our preferred options

Updated 6 months ago

blastula • Rank 20.5 • Science 26%

Easily send great-looking HTML email messages from R

Updated 6 months ago

markdown-tools • Rank 1.1 • Science 44%

SixArm.com » Markdown » Scripts for parsing markdown

Updated 5 months ago

linl • Rank 16.3 • Science 26%

Linl Is Not Letter -- Markdown-based LaTeX Letter Template

Updated 5 months ago

https://github.com/zettel-lint/zettel-lint • Rank 11.8 • Science 26%

A linter/compiler for markdown-based Zettelkasten git repositories

Updated 4 months ago

https://github.com/fanchengyan/myst-sphinx-gallery • Rank 9.8 • Science 23%

A Sphinx extension that builds galleries from myst-style markdown, notebook or rst files.

Updated 6 months ago

bilge • Rank 6.6 • Science 26%

Documentation for The Psalms - my blog about software’s intersection with culture. Not just for the website - for the entire process (correspondence, notetaking, drafting, *revising*, editorializing, promoting, discussing, and even reflecting.)

Updated 5 months ago

https://github.com/akiomik/mado • Rank 6.5 • Science 26%

A fast Markdown linter written in Rust.

Updated 5 months ago

https://github.com/daizutabi/panpdf • Rank 5.7 • Science 26%

Transform Jupyter Notebooks and Markdown into publication-quality PDF documents with high-fidelity visualizations

Updated 6 months ago

degoogle-your-life • Rank 5.6 • Science 26%

A repository for general degoogling info and links to my other degoogling repositories.

Updated 5 months ago

https://github.com/chrisgrieser/obsidian-smarter-md-hotkeys • Rank 7.0 • Science 23%

A plugin for Obsidian providing hotkeys that select words and lines in a smart way before applying markup. Multiple cursors are supported as well.

Updated 6 months ago

candroid-catalogue • Rank 1.8 • Science 26%

🤖️💾️📃️ The Candroid application catalog. Main repository: https://github.com/seanpm2001/Candroid/tree/main/Candroid-Catalogue/

Updated 5 months ago

https://github.com/agoose77/jupyterlab-markup • Rank 12.3 • Science 13%

JupyterLab extension to enable markdown-it rendering, with support for markdown-it plugins

Updated 6 months ago

cicero • Rank 10.6 • Science 13%

:microphone: Serving presentation slides written in Markdown.

Updated 5 months ago

https://github.com/outline/rich-markdown-editor • Rank 11.9 • Science 10%

The open source React and Prosemirror based markdown editor that powers Outline. Want to try it out? Create an account:

Updated 5 months ago

snippy • Rank 8.0 • Science 13%

Snippy is a software development and maintenance notes manager.

Updated 4 months ago

https://github.com/devidw/hashnode-export-to-markdown • Rank 0.0 • Science 13%

Convert Hashnode export JSON into single markdown files with frontmatter and downloads of your cover images

Updated 6 months ago

clld-document-plugin • Science 44%

Document model and rendering in CLLD apps.

Updated 6 months ago

pandoc-thesis • Science 44%

Pandoc Thesis Template: A Template for Thesis Documents written in Markdown

Updated 5 months ago

https://github.com/3p5ilon/nextfolio • Science 26%

A clean, fast, & lightweight portfolio template built with Next.js, Vercel, and Tailwind CSS.

Updated 6 months ago

scientific-metadata • Science 31%

Introduction to the Fundamentals of Scientific Metadata

Updated 6 months ago

pandoc-lecture-zen • Science 44%

Pandoc-Lecture-Zen: This action will run the new Pandoc-Lecture toolchain from https://github.com/cagix/pandoc-lecture-zen (Ubuntu runner only)

Updated 6 months ago

ggexpress • Science 44%

ggExpress is the fastest way to create, annotate and and save plots in R.

Updated 5 months ago

https://github.com/allefeld/atom-pandoc-pdf • Science 13%

Use Pandoc to create a PDF from an Atom editor pane, and view it in another pane.

Updated 6 months ago

sophosia • Science 31%

THE reference manager with features including PDF reading/annotating, Markdown/Excalidraw note-taking, project/note linking, and more...

Updated 6 months ago

lingdocs • Science 44%

Create data-rich linguistic documents.

Updated 5 months ago

https://github.com/alexstormwood/mar25-t1w2-git-intro • Science 13%

Repo for example website stuff and introductory git usage

Updated 6 months ago

markdownreports • Science 49%

Type Less, Plot More. Create and auto-annotated and -saved (base) plots with very little code, and write (markdown) reports easily from your R scripts.

Updated 6 months ago

baler • Science 75%

Bad link reporter for GitHub repositories

Updated 6 months ago

notchware • Science 26%

Notchware is a category of software that aims to use the hardware notch section of the screen for its operations.

Updated 5 months ago

https://github.com/amr-yasser226/data-mining-and-information-retrieval • Science 26%

Revision notes and MCQs for DSAI 201 – Data Mining and Information Retrieval. Includes lecture summaries, algorithm overviews, and practice questions to support course preparation and review.

Updated 6 months ago

blogit • Science 44%

A tool for curating Common Mark and Markdown front matter and publishing to a staging blog directory.

Updated 6 months ago

lc-authoring-open-science • Science 44%

Introduces open science practices in writing, publishing, and peer review. Covers open tools, contributor roles, and how transparency supports reproducibility and equity.

Updated 5 months ago

https://github.com/bigfootds/sourcepool • Science 13%

TTRPG content management system, ready for you to self-host. Documentation website for the various bits of the Sourcepool ecosystem.

Updated 6 months ago

docs • Science 44%

LiaScript documentation course

Updated 4 months ago

https://github.com/erictleung/jamia-markdown-template • Science 13%

:closed_book: Unofficial Journal of American Medical Informatics Association (JAMIA) Markdown Journal Article Template

Updated 5 months ago

https://github.com/abhishektiwari/markdown-to-arxiv • Science 13%

Template repository to write academic research paper using markdown and generate arXiv submission

Updated 5 months ago

https://github.com/aspose-cells/aspose-cells-go-cpp • Science 26%

Go (Golang) Excel Library – Create, Edit, Save, Export, and Convert Spreadsheets (XLSX, ODS, JSON, PDF, Markdown)

Updated 6 months ago

dsuite • Science 44%

✉️🗓️♣️ DSuite is a online/offline software suite of productivity software for email and calendars. It is the parent of DCal/DCalendar and DMAIL

Updated 6 months ago

pandoc-markdown-latex-pdf • Science 67%

Example of how to produce scientific, academic, and technical PDF documents such as essays, reports, or thesis by writing Markdown and converting with Pandoc via LaTeX. We also included build and release automation with GitHub actions.

Updated 5 months ago

https://github.com/databio/markmeld • Science 26%

A Python package for melding markdown content and YAML structured data

Updated 5 months ago

https://github.com/databio/sciquill • Science 26%

Author academic documents in markdown

Updated 6 months ago

sds_env • Science 54%

Spatial Data Science Environment

Updated 5 months ago

https://github.com/aveek-saha/gistblog • Science 26%

Turn your Gists into blog posts.

Updated 5 months ago

https://github.com/boisgera/mediane • Science 26%

Jupyter Notebooks in Education

Updated 6 months ago

pandoc-lecture • Science 44%

Pandoc Markdown Lecture Template: This project defines a skeleton repo for creating lecture slides and handouts including lecture notes out of Pandoc Markdown (https://pandoc.org/MANUAL.html) using a single source approach.

Updated 6 months ago

pathogens-portal • Science 67%

Swedish pathogens portal

Updated 6 months ago

seansaudiodb • Science 26%

The personal version of my audio collection database. Not intended for public use. See the other version that is intended for public use: https://github.com/seanpm2001/AudiBass_Manager

Updated 6 months ago

privacyguides.org • Science 54%

Protect your data against global mass surveillance programs.

Updated 6 months ago

utf9k • Science 44%

My personal site. Contains my blog and other useful sections

Updated 6 months ago

base • Science 44%

Collection of base files useful when scaffolding a new project.

Updated 6 months ago

fusion-neutronics-presentation-slides • Science 26%

An open source slide deck on fusion neutronics

Updated 6 months ago

wovensnips • Science 44%

WovenSnips: A Lightweight, Free, and Open-source Implementation of Retrieval-Augmented Generation (RAG) using Straico API